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split.rs
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split.rs
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static USAGE: &str = r#"
Splits the given CSV data into chunks.
The files are written to the directory given with the name '{start}.csv',
where {start} is the index of the first record of the chunk (starting at 0).
Examples:
qsv split outdir --size 100 --filename chunk_{}.csv input.csv
qsv split outdir -s 100 --filename chunk_{}.csv --pad 5 input.csv
qsv split . -s 100 input.csv
cat in.csv | qsv split outdir -s 1000
For more examples, see https://github.com/jqnatividad/qsv/blob/master/tests/test_split.rs.
Usage:
qsv split [options] <outdir> [<input>]
qsv split --help
split arguments:
<outdir> The directory where the output files will be written.
If it does not exist, it will be created.
<input> The CSV file to read. If not given, input is read from
STDIN.
split options:
-s, --size <arg> The number of records to write into each chunk.
[default: 500]
-j, --jobs <arg> The number of splitting jobs to run in parallel.
This only works when the given CSV data has
an index already created. Note that a file handle
is opened for each job.
When not set, the number of jobs is set to the
number of CPUs detected.
--filename <filename> A filename template to use when constructing
the names of the output files. The string '{}'
will be replaced by a value based on the value
of the field, but sanitized for shell safety.
[default: {}.csv]
--pad <arg> The zero padding width that is used in the
generated filename.
[default: 0]
Common options:
-h, --help Display this message
-n, --no-headers When set, the first row will NOT be interpreted
as column names. Otherwise, the first row will
appear in all chunks as the header row.
-d, --delimiter <arg> The field delimiter for reading CSV data.
Must be a single character. (default: ,)
"#;
use std::{fs, io, path::Path};
use rayon::iter::{IntoParallelIterator, ParallelIterator};
use serde::Deserialize;
use crate::{
config::{Config, Delimiter},
index::Indexed,
util::{self, FilenameTemplate},
CliResult,
};
#[derive(Clone, Deserialize)]
struct Args {
arg_input: Option<String>,
arg_outdir: String,
flag_size: usize,
flag_jobs: Option<usize>,
flag_filename: FilenameTemplate,
flag_pad: usize,
flag_no_headers: bool,
flag_delimiter: Option<Delimiter>,
}
pub fn run(argv: &[&str]) -> CliResult<()> {
let args: Args = util::get_args(USAGE, argv)?;
if args.flag_size == 0 {
return fail_incorrectusage_clierror!("--size must be greater than 0.");
}
// check if outdir is set correctly
if Path::new(&args.arg_outdir).is_file() && args.arg_input.is_none() {
return fail_incorrectusage_clierror!("<outdir> is not specified or is a file.");
}
fs::create_dir_all(&args.arg_outdir)?;
match args.rconfig().indexed()? {
Some(idx) => args.parallel_split(&idx),
None => args.sequential_split(),
}
}
impl Args {
fn sequential_split(&self) -> CliResult<()> {
let rconfig = self.rconfig();
let mut rdr = rconfig.reader()?;
let headers = rdr.byte_headers()?.clone();
let mut wtr = self.new_writer(&headers, 0, self.flag_pad)?;
let mut i = 0;
let mut row = csv::ByteRecord::new();
while rdr.read_byte_record(&mut row)? {
if i > 0 && i % self.flag_size == 0 {
wtr.flush()?;
wtr = self.new_writer(&headers, i, self.flag_pad)?;
}
wtr.write_byte_record(&row)?;
i += 1;
}
wtr.flush()?;
Ok(())
}
fn parallel_split(&self, idx: &Indexed<fs::File, fs::File>) -> CliResult<()> {
let nchunks = util::num_of_chunks(idx.count() as usize, self.flag_size);
if nchunks == 1 {
// there's only one chunk, we can just do a sequential split
// which has less overhead and better error handling
return self.sequential_split();
}
let args = self.clone();
util::njobs(args.flag_jobs);
// safety: we cannot use ? here because we're in a closure
(0..nchunks).into_par_iter().for_each(|i| {
let conf = args.rconfig();
// safety: safe to unwrap because we know the file is indexed
let mut idx = conf.indexed().unwrap().unwrap();
// safety: the only way this can fail is if the file first row of the chunk
// is not a valid CSV record, which is impossible because we're reading
// from a file with a valid index
let headers = idx.byte_headers().unwrap();
let mut wtr = args
// safety: the only way this can fail is if we cannot create a file
.new_writer(headers, i * args.flag_size, args.flag_pad)
.unwrap();
// safety: we know that there is more than one chunk, so we can safely
// seek to the start of the chunk
idx.seek((i * args.flag_size) as u64).unwrap();
for row in idx.byte_records().take(args.flag_size) {
let row = row.unwrap();
wtr.write_byte_record(&row).unwrap();
}
// safety: safe to unwrap because we know the writer is a file
// the only way this can fail is if we cannot write to the file
wtr.flush().unwrap();
});
Ok(())
}
fn new_writer(
&self,
headers: &csv::ByteRecord,
start: usize,
width: usize,
) -> CliResult<csv::Writer<Box<dyn io::Write + 'static>>> {
let dir = Path::new(&self.arg_outdir);
let path = dir.join(self.flag_filename.filename(&format!("{start:0>width$}")));
let spath = Some(path.display().to_string());
let mut wtr = Config::new(&spath).writer()?;
if !self.rconfig().no_headers {
wtr.write_record(headers)?;
}
Ok(wtr)
}
fn rconfig(&self) -> Config {
Config::new(&self.arg_input)
.delimiter(self.flag_delimiter)
.no_headers(self.flag_no_headers)
}
}