# Scanpy outfiles /data/ /write/ # Docs /docs/_build/ /docs/generated/ /docs/data/ /docs/api/generated /docs/external/generated /docs/jupyter_execute # tests /*cache/ /test-data/ /tests/test*.h5ad /tests/**/*actual.png /tests/**/*failed-diff.png # Environment management /Pipfile /Pipfile.lock /requirements*.lock # always-ignore extensions *~ # Python build files __pycache__/ /src/scanpy/_version.py /dist/ /*-env/ /env-*/ /environment.yml # OS stuff .DS_Store Thumbs.db .ipynb_checkpoints/ .directory # IDEs and editors /.idea/ /.vscode/ # asv benchmark files /benchmarks/.asv /benchmarks/data/