Visualize HMMs, CMs and their comparisons

Parsing MHC nomenclature in the wild

Ankh: Optimized Protein Language Model

Peptide-MHC I binding affinity prediction

MHC-peptide class II interaction prediction, binding, presentation

Simplified CA and device cert manager for strongSwan VPN

Non-parametric Entropy Estimation Toolbox

BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)

Excess mortality during COVID-19 pandemic

A list of tools on proteomics using deep learning

Medical image registration using deep learning

Hidden Markov Models Class on top of TensorFlow

Python library for learning the graphical structure of Bayesian networks, parameter learning, inference and sampling methods.

PLAtEAU Immunopeptidome Analysis

Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.

Bayesian parameter estimation of HMMs in Julia

Fast Bayesian Hidden Markov Model with Wavelet Compression

A non-parametric Bayesian approach to Hidden Markov Models

Parallel Implementation of HMM on Multicore Platform

Programs for map handling, based on mapsoft2-libs

This is a project serves as a front end for the Jlsca. It enables the user to automate the analysis part of correlation power analysis (CPA) using ChipWhisperer power traces and the Jlsca analysis …

Calculate z-scores of anthropometric measurements based on WHO and CDC child growth standards

Ledger's Advanced Side-Channel Analysis Repository

Custom Jupyter Notebook Themes

Fast, flexible and easy to use probabilistic modelling in Python.

An implementation of AES-256 RSM attack.

Writeups for the RHME3 Challenges

Sequence learning toolkit for Python

Hidden Markov Models in Python, with scikit-learn like API