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Issues list

Error in textConnection(BioMartVersion) : invalid 'text' argument
#60 opened Apr 21, 2022 by sigven
6 👍 2
Error getLDS()
#100 opened Mar 21, 2024 by Kan-E
2 👍 2
Error: biomaRt has encountered an unknown server error. HTTP error code: 404
#82 opened Jun 19, 2023 by hyjforesight
1 👍 1
Error: biomaRt has encountered an unknown server error. HTTP error code: 502（404）
#85 opened Aug 3, 2023 by AndoYutaro
1 👍 1
Print genome version being queried
#46 opened Mar 4, 2021 by grimbough
@grimbough
👍 1
Error accessing biomart
#98 opened Mar 20, 2024 by SamTah
👍 1
getBM returns logical minor_allele column when minor_allele = T
#12 opened May 7, 2019 by sinarueeger
@grimbough
2
error with getSequence
#18 opened Jun 24, 2019 by SalvatoreRa
7
Error with getBM() - no such table : metadata
#24 opened Sep 8, 2020 by Manaswwm
8
Possible bug in getSequence()
#33 opened Nov 2, 2020 by gtollefson
4
Error with biomaRt_2.46.0
#35 opened Nov 11, 2020 by weijiaru
biomaRt not finding all genes
#37 opened Dec 7, 2020 by danielcgingerich
Possible SSL connectivity problems detected.
#44 opened Feb 9, 2021 by evareisinger
11
argument "httr_config" is missing, with no default in useMart() call for archival versions
#50 opened Oct 18, 2021 by lambdamoses
@grimbough
3
Proxy issue from version 2.48.0
#52 opened Nov 3, 2021 by echarpentier
Erroneous residues at the end of peptide sequences
#112 opened Oct 2, 2024 by KoppGergely
Lock error in 4.1.1 not in 4.03
#55 opened Feb 21, 2022 by ZheFrench
3
Error in curl::curl_fetch_memory(url, handle = handle) :
#57 opened Mar 2, 2022 by zillurbmb51
biomaRt::getBM can't parse attributes from plants.ensembl.org archive
#58 opened Mar 27, 2022 by edoardobertolini
biomaRt error in converting mouse to hg gene orthologs
#61 opened Apr 22, 2022 by pallavisurana1
@grimbough
15
Error getLDS() - Error in attributes(.Data)
#66 opened May 24, 2022 by saphir746
5
Error with getBM with certain attributes ("go_id")
#69 opened Aug 31, 2022 by licmn
1
Ensembl site unresponsive, trying useast mirror
#70 opened Oct 12, 2022 by Shicheng-Guo
1
Argument "host" is missing, with no default using useEnsembl
#72 opened Oct 29, 2022 by ferygood
How to specify the version for Plants.ensemble ?
#53 opened Dec 14, 2021 by Sherry520
1
ProTip! no:milestone will show everything without a milestone.