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Support AlphaFold2 #265

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martin-steinegger opened this issue Jun 17, 2023 · 0 comments
Open

Support AlphaFold2 #265

martin-steinegger opened this issue Jun 17, 2023 · 0 comments

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@martin-steinegger
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AlphaFold2 is heavily used by the life science community to predict protein structures. AlphaFold is written in Jax and already runs on CPUs. However, it would be amazing to have a CPU version with ggml with all the speed-ups achieved through quantization.

Deepmind has recently implemented bfloat16 inference with pretty much equivalent performance. I think further quantization should be possible and beneficial.

Additionally, having a (python) dependency-free implementation would help us a lot in ColabFold.

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