Bioinformatics, genomics, agriculture, food science, medicine, genetic engineering, etc...
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BioJulia group on github, and the GoogleGroups mailing list:: https://groups.google.com/forum/?fromgroups#!forum/biojulia-dev
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JuliaBio group on github, and the GoogleGroups mailing list :: https://groups.google.com/forum/#!forum/julia-bio
- Bio.jl :: Bioinformatics and Computational Biology Infrastructure for Julia. Wiki documentation of core features
- BioSeq.jl :: Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences.
- Circuitscape.jl :: The Julia implementation of the Circuitscape lib in Python that uses electronic circuit theory to solve problems in landscape ecology.
- IntervalTrees.jl :: A data structure for efficient manipulation of sets of intervals.
- OBC.jl :: Optimal Bayesian classification for RNA-Seq data.
- smoothlife-jl :: an implementation of the SmoothLife algorithm in Julia.
- taxize.jl :: A taxonomic toolbelt for Julia.
- ROC.jl :: Receiver Operating Characteristic (ROC) Curve for Julia Language.
- FastaIO.jl :: [Utilities to read/write FASTA format files in Julia.
- GaussDCA.jl :: Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families.
- GeneticAlgorithms.jl :: is a lightweight framework that simplifies the process of creating genetic algorithms and running them in parallel.
- gtf-parse-off :: Experiments with parsing gene transfer format (GTF).
- Phylogenetics.jl :: The Julia package for analysis of evolution and phylogeny.
- Pagel.jl :: can detect correlated evolution on phylogenies.
- pikaia.jl :: Genetic Algorithms (GA's).
- SeqUtils.jl :: Seqencing analysis Utilities for Julia.
- StatGenData.jl :: Statistical analysis of genomic data.
- ElectroJulia.jl :: Julia functions to process electroencephalographic recordings.
- SpikeSorter.jl :: Spike sorting tool for experimental neuroscientists.