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Issues list

Convert gorule-0000011 from legacy (owltools) to implemented annotation rule
#716 by pgaudet was closed Sep 6, 2018
@dougli1sqrd
5
PAINT annotations should be merged into group GAFs as part of release pipeline
#461 by pgaudet was closed Jan 10, 2018
@dougli1sqrd
4
Update GPAD specifications action item from 2018-05 NYC GOC mtg action item from 2018-10 Montreal GOC mtg
#674 by pgaudet was closed Sep 7, 2023
9
Implement gorule-0000022 QC check for annotations to retracted publications annotation rule revisit
#676 by pgaudet was closed Jul 18, 2024
@pgaudet
43
gorule-0000008 (no annotations should be made to high level terms) should be a soft check annotation rule
#679 by pgaudet was closed Nov 26, 2019
@dougli1sqrd
2
Fix rule gorule-0000006.md annotation rule bug (B: affects usability)
#698 by pgaudet was closed Aug 29, 2018
@dougli1sqrd
3
Fix gorule-0000008.md annotation rule
#699 by pgaudet was closed Nov 1, 2018
@dougli1sqrd @pgaudet
14
Can we get more information about proposed gorule-0000009.md annotation rule
#700 by pgaudet was closed Aug 13, 2018
20
Create SPARQL for gorule-0000011.md
#701 by pgaudet was closed Sep 6, 2018
@dougli1sqrd
1
Disable old jenkins reports and add a note in the header for each pointing to the wiki.
#702 by pgaudet was closed Aug 14, 2018
@kltm
8
Annotation files on GO-website - are they pointing to the correct releases? duplicate
#703 by pgaudet was closed Jul 13, 2018
1
IEAs more than 1 year old should be filtered out bug (B: affects usability)
#710 by pgaudet was closed Sep 11, 2018
@pgaudet
9
Automatic alerting when an annotation is removed which has ISS inferences annotation rule wontfix
#200 by pgaudet was closed Jun 24, 2020
@cmungall
1
Check 'basic GAF checks' against Stanford implementation
#715 by pgaudet was closed Mar 25, 2019
@pgaudet
3
Convert gorule-0000016 from legacy (owltools) to implemented annotation rule
#718 by pgaudet was closed Oct 3, 2018
@dougli1sqrd
2
PAINT annotations removed in Panther Version 13.1 (released 2018-02-03) still in PAINT GAFs bug (B: affects usability) upstream
#725 by pgaudet was closed Aug 7, 2018
@pgaudet @huaiyumi
35
OWLTools taxon constraint reports contain unexpected results (and gorule-0000013.md) bug (B: affects usability) question
#734 by pgaudet was closed Aug 29, 2018
@dougli1sqrd
13
Problem with reports ? invalid
#735 by pgaudet was closed Jul 31, 2018
@dougli1sqrd
1
GORULE:0000021 and GORULE:0000027 are essentially the same invalid
#738 by pgaudet was closed Sep 6, 2018
@dougli1sqrd
1
Fix implementation of GORULE:0000027 annotation rule
#739 by pgaudet was closed Nov 1, 2018
@dougli1sqrd
5
Implement gorule-0000022 - retracted publications annotation rule
#740 by pgaudet was closed Jun 19, 2019
@dougli1sqrd
1
GORULE:0000023 'Materialize annotations for inter-branch links in the GO' is not a rule annotation rule
#741 by pgaudet was closed Mar 28, 2019
@cmungall @dougli1sqrd @pgaudet
2
Implement gorule-0000030 Deprecated GO_REFs are not allowed annotation rule
#742 by pgaudet was closed Jun 19, 2019
@dougli1sqrd
2
Remove files from ftp:https://ftp.geneontology.org/pub/go/gene-associations/submission/paint and replace by a README file bug (A: showstopper)
#747 by pgaudet was closed Jul 3, 2019
1
Deprecate gorule-0000031: it is not implemented, and redundant with gorule-0000059 and gorule-0000061 annotation rule
#2352 by pgaudet was closed Jul 25, 2024
1
@pgaudet
ProTip! no:milestone will show everything without a milestone.