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Update ShEx for new MF-MF relations #280

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vanaukenk opened this issue Oct 11, 2022 · 0 comments
Open

Update ShEx for new MF-MF relations #280

vanaukenk opened this issue Oct 11, 2022 · 0 comments
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enhancement New feature or request
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DONE Relations to link MFs

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@vanaukenk
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vanaukenk commented Oct 11, 2022 •
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Add to declarations at the top:

PREFIX indirectly_regulates: http:https://purl.obolibrary.org/obo/RO_0012012
PREFIX indirectly_positively_regulates: http:https://purl.obolibrary.org/obo/RO_0002407
PREFIX indirectly_negatively_regulates: http:https://purl.obolibrary.org/obo/RO_0002409
PREFIX constitutively_upstream_of: http:https://purl.obolibrary.org/obo/RO_0012009
PREFIX removes_input_for: http:https://purl.obolibrary.org/obo/RO_0012010

Add to the Molecular Function shape:

indirectly_regulates: ( @<MolecularFunction> OR @<MolecularEvent>) *;
indirectly_positively_regulates: ( @<MolecularFunction> OR @<MolecularEvent> ) *;
indirectly_negatively_regulates: ( @<MolecularFunction> OR @<MolecularEvent> ) *;
constitutively_upstream_of: ( @<MolecularFunction> OR @<MolecularEvent> ) *;
removes_input_for: ( @<MolecularFunction> OR @<MolecularEvent> ) *;

@pgaudet @ukemi
@vanaukenk vanaukenk added the enhancement New feature or request label Oct 11, 2022
@vanaukenk vanaukenk self-assigned this Oct 11, 2022
@vanaukenk vanaukenk moved this from To do to In progress in DONE Relations to link MFs Oct 14, 2022
@vanaukenk vanaukenk moved this from In progress to Done in DONE Relations to link MFs Jan 26, 2023
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