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Relax constraints on has-input to allow SO sequence features #258

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lpalbou opened this issue Feb 26, 2021 · 0 comments
Open

Relax constraints on has-input to allow SO sequence features #258

lpalbou opened this issue Feb 26, 2021 · 0 comments
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@lpalbou
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lpalbou commented Feb 26, 2021

Following shex errors mentioned in geneontology/geneontology.github.io#269 (comment) and the discussion on shex error reporting: #257

A model was spotted invalid by shex because of an activity has input SO term. SO term don't seem to be handled in shex right now, if we wanted to authorize such pattern, it would have to be added here:

has_input: ( @<ChemicalEntity> OR @<ProteinContainingComplex> ) *;

@cmungall cmungall changed the title Shapes and SO terms ? Relax constraints on has-input to allow SO sequence features Feb 26, 2021
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