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@Genentech

Genentech

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  1. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 117 15

  2. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 81 1

  3. polygraph polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 27

  4. beignet beignet Public

    A standard library for biological research.

    Python 14 5

Repositories

Showing 10 of 89 repositories
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 159 MIT 14 7 6 Updated Jul 25, 2024
  • beignet Public

    A standard library for biological research.

    Genentech/beignet’s past year of commit activity
    Python 14 MIT 5 9 14 Updated Jul 24, 2024
  • checked Public
    Genentech/checked’s past year of commit activity
    R 2 1 4 2 Updated Jul 24, 2024
  • psborrow2 Public

    psborrow2: Bayesian Dynamic Borrowing Simulation Study and Analysis

    Genentech/psborrow2’s past year of commit activity
    R 16 2 5 2 Updated Jul 23, 2024
  • Genentech/spex_frontend’s past year of commit activity
    JavaScript 1 MIT 2 0 0 Updated Jul 20, 2024
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
  • scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Genentech/scimilarity’s past year of commit activity
    Python 81 1 5 0 Updated Jul 15, 2024
  • Genentech/SpatialQPFs’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 15, 2024
  • Islander Public
    Genentech/Islander’s past year of commit activity
    Jupyter Notebook 5 MIT 0 0 0 Updated Jul 11, 2024
  • covtracer Public

    Tools for contextualizing tests, built using covr test traces.

    Genentech/covtracer’s past year of commit activity
    R 21 4 9 0 Updated Jul 10, 2024

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