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cp@fgcz-148:~ > R
R version 4.0.2 (2020-06-22) -- "Taking Off Again"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
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[Previously saved workspace restored]
R> library(rawDiag)
Package 'rawDiag' version 0.0.34
R> ?read.raw
R> ?read.raw
R> (rawfile <- file.path(path.package(package = 'rawDiag'), 'extdata', 'sample.raw'))
[1] "/home/cp/R/x86_64-pc-linux-gnu-library/4.0/rawDiag/extdata/sample.raw"
system.time(RAW <- read.raw(file = rawfile))
R> system.time(RAW <- read.raw(file = rawfile))
executing mono /home/cp/R/x86_64-pc-linux-gnu-library/4.0/rawDiag/exec/fgcz_raw.exe /home/cp/R/x86_64-pc-linux-gnu-library/4.0/rawDiag/extdata/sample.raw qc ...
MasterScanNumber calculated
renamed LMmZCorrectionppm to LMCorrection
renamed AGCPSMode to PrescanMode
user system elapsed
0.411 0.043 0.442
Warning messages:
1: In is.rawDiag(object) :
missing column name(s): MasterScanNumber, LMCorrection, ElapsedScanTimesec, transient, AGCMode, PrescanMode
2: `funs()` is deprecated as of dplyr 0.8.0.
Please use a list of either functions or lambdas:
# Simple named list:
list(mean = mean, median = median)
# Auto named with `tibble::lst()`:
tibble::lst(mean, median)
# Using lambdas
list(~ mean(., trim = .2), ~ median(., na.rm = TRUE))
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
R> PlotScanFrequency(RAW)
Error: `x` must be a vector, not a `data.frame/rawDiag` object.
Run `rlang::last_error()` to see where the error occurred.
R>
The text was updated successfully, but these errors were encountered:
The text was updated successfully, but these errors were encountered: