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installation error #976

Closed
supreme-core opened this issue May 21, 2019 · 4 comments
Closed

installation error #976

supreme-core opened this issue May 21, 2019 · 4 comments

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@supreme-core
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Running pip3 install yields:

=======================================================================
Collecting fbprophet
Downloading https://files.pythonhosted.org/packages/33/fb/ad98d46773929079657706e6b2b6e366ba6c282bc2397d8f9b0ea8e5614c/fbprophet-0.5.tar.gz (49kB)
100% |████████████████████████████████| 51kB 979kB/s
Requirement already satisfied: Cython>=0.22 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.29.7)
Requirement already satisfied: pystan>=2.14 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (2.19.0.0)
Requirement already satisfied: numpy>=1.10.0 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (1.16.2)
Requirement already satisfied: pandas>=0.23.4 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.24.2)
Requirement already satisfied: matplotlib>=2.0.0 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (3.0.3)
Requirement already satisfied: lunardate>=0.1.5 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.2.0)
Collecting convertdate>=2.1.2 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/74/83/d0fa07078f4d4ae473a89d7d521aafc66d82641ea0af0ef04a47052e8f17/convertdate-2.1.3-py2.py3-none-any.whl
Collecting holidays>=0.9.5 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/16/09/c882bee98acfa310933b654697405260ec7657c78430a14e785ef0f1314b/holidays-0.9.10.tar.gz (73kB)
100% |████████████████████████████████| 81kB 6.9MB/s
Collecting setuptools-git>=1.2 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/05/97/dd99fa9c0d9627a7b3c103a00f1566d8193aca8d473884ed258cca82b06f/setuptools_git-1.2-py2.py3-none-any.whl
Requirement already satisfied: pytz>=2011k in /usr/local/lib/python3.7/dist-packages (from pandas>=0.23.4->fbprophet) (2018.9)
Requirement already satisfied: python-dateutil>=2.5.0 in /usr/local/lib/python3.7/dist-packages (from pandas>=0.23.4->fbprophet) (2.8.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (1.0.1)
Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (0.10.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (2.4.0)
Collecting ephem<3.8,>=3.7.5.3 (from convertdate>=2.1.2->fbprophet)
Downloading https://files.pythonhosted.org/packages/c3/2c/9e1a815add6c222a0d4bf7c644e095471a934a39bc90c201f9550a8f7f14/ephem-3.7.6.0.tar.gz (739kB)
100% |████████████████████████████████| 747kB 13.8MB/s
Requirement already satisfied: six in /usr/local/lib/python3.7/dist-packages (from holidays>=0.9.5->fbprophet) (1.12.0)
Requirement already satisfied: setuptools in /usr/local/lib/python3.7/dist-packages (from kiwisolver>=1.0.1->matplotlib>=2.0.0->fbprophet) (40.6.3)
Installing collected packages: ephem, convertdate, holidays, setuptools-git, fbprophet
Running setup.py install for ephem ... error
Complete output from command /usr/bin/python3.7 -u -c "import setuptools, tokenize;file='/tmp/pip-install-6ccy1f3a/ephem/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-record-0hvyysgo/install-record.txt --single-version-externally-managed --compile:
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.7
creating build/lib.linux-x86_64-3.7/ephem
copying ephem/cities.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/init.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/stars.py -> build/lib.linux-x86_64-3.7/ephem
creating build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_stars.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_dates.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_constants.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_satellite.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_jpl.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_244811.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_cities.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_rst.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno_equinoxes.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/init.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_angles.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_bodies.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_github_issues.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_locales.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_observers.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_236872.py -> build/lib.linux-x86_64-3.7/ephem/tests
creating build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/faq.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/angle.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/newton.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/coordinates.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/catalogs.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/reference.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/index.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/date.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/tutorial.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/CHANGELOG.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/radec.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/rise-set.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/examples.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/quick.rst -> build/lib.linux-x86_64-3.7/ephem/doc
creating build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/oberon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/mars.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/phobos.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/uranus.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/saturn.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/hyperion.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/europa.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
creating build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_antares.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/moon_phases.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_mercury.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_rigel.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
running build_ext
building 'ephem._libastro' extension
creating build/temp.linux-x86_64-3.7
creating build/temp.linux-x86_64-3.7/extensions
creating build/temp.linux-x86_64-3.7/libastro-3.7.6
creating build/temp.linux-x86_64-3.7/extensions/data
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ilibastro-3.7.6 -I/usr/include/python3.7m -c extensions/_libastro.c -o build/temp.linux-x86_64-3.7/extensions/_libastro.o
x86_64-linux-gnu-gcc: error trying to exec 'cc1': execvp: No such file or directory
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

----------------------------------------

Command "/usr/bin/python3.7 -u -c "import setuptools, tokenize;file='/tmp/pip-install-6ccy1f3a/ephem/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-record-0hvyysgo/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-6ccy1f3a/ephem/
You are using pip version 18.1, however version 19.1.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command
@supreme-core
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I tried to run pystan script outside of fbprophet as per instruction on
#346 (comment)

Script ran unsuccessfully.

@bletham
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Contributor

bletham commented May 21, 2019

Hm so pystan it seems it not working. Can you check what version of gcc you have? Pystan 2.19 requires C++14, which is not handled by old versions of gcc, I'm wondering if that might be the issue.

@supreme-core
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Author

To get the latest version of gcc g++
sudo add-apt-repository ppa:ubuntu-toolchain-r/test
sudo apt-get update
sudo apt-get install gcc-8 g++-8
gcc-8 --version

Pystan install went through okay but I still can't install fbprophet
So, I reinstall build-essential package
sudo apt-get install build-essential --reinstall

It complains about compilation with x86_65-linux-gnu-gcc, and the version I have 7.4

Collecting fbprophet
Downloading https://files.pythonhosted.org/packages/33/fb/ad98d46773929079657706e6b2b6e366ba6c282bc2397d8f9b0ea8e5614c/fbprophet-0.5.tar.gz (49kB)
|████████████████████████████████| 51kB 561kB/s
Requirement already satisfied: Cython>=0.22 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.29.7)
Requirement already satisfied: pystan>=2.14 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (2.19.0.0)
Requirement already satisfied: numpy>=1.10.0 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (1.16.2)
Requirement already satisfied: pandas>=0.23.4 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.24.2)
Requirement already satisfied: matplotlib>=2.0.0 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (3.0.3)
Requirement already satisfied: lunardate>=0.1.5 in /usr/local/lib/python3.7/dist-packages (from fbprophet) (0.2.0)
Collecting convertdate>=2.1.2 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/74/83/d0fa07078f4d4ae473a89d7d521aafc66d82641ea0af0ef04a47052e8f17/convertdate-2.1.3-py2.py3-none-any.whl
Collecting holidays>=0.9.5 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/16/09/c882bee98acfa310933b654697405260ec7657c78430a14e785ef0f1314b/holidays-0.9.10.tar.gz (73kB)
|████████████████████████████████| 81kB 2.7MB/s
Collecting setuptools-git>=1.2 (from fbprophet)
Downloading https://files.pythonhosted.org/packages/05/97/dd99fa9c0d9627a7b3c103a00f1566d8193aca8d473884ed258cca82b06f/setuptools_git-1.2-py2.py3-none-any.whl
Requirement already satisfied: pytz>=2011k in /usr/local/lib/python3.7/dist-packages (from pandas>=0.23.4->fbprophet) (2018.9)
Requirement already satisfied: python-dateutil>=2.5.0 in /usr/local/lib/python3.7/dist-packages (from pandas>=0.23.4->fbprophet) (2.8.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (2.4.0)
Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (0.10.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.7/dist-packages (from matplotlib>=2.0.0->fbprophet) (1.0.1)
Collecting ephem<3.8,>=3.7.5.3 (from convertdate>=2.1.2->fbprophet)
Downloading https://files.pythonhosted.org/packages/c3/2c/9e1a815add6c222a0d4bf7c644e095471a934a39bc90c201f9550a8f7f14/ephem-3.7.6.0.tar.gz (739kB)
|████████████████████████████████| 747kB 6.3MB/s
Requirement already satisfied: six in /usr/local/lib/python3.7/dist-packages (from holidays>=0.9.5->fbprophet) (1.12.0)
Requirement already satisfied: setuptools in /usr/local/lib/python3.7/dist-packages (from kiwisolver>=1.0.1->matplotlib>=2.0.0->fbprophet) (40.6.3)
Building wheels for collected packages: fbprophet, holidays, ephem
Building wheel for fbprophet (setup.py) ... error
ERROR: Complete output from command /usr/bin/python3.7 -u -c 'import setuptools, tokenize;file='"'"'/tmp/pip-install-_whfedar/fbprophet/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9vdftyph --python-tag cp37:
ERROR: running bdist_wheel
running build
running build_py
creating build
creating build/lib
creating build/lib/fbprophet
creating build/lib/fbprophet/stan_model
INFO:pystan:COMPILING THE C++ CODE FOR MODEL anon_model_861b75c6337e237650a61ae58c4385ef NOW.
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

ERROR: Failed building wheel for fbprophet
Running setup.py clean for fbprophet
Building wheel for holidays (setup.py) ... done
Stored in directory: /home/eric/.cache/pip/wheels/2d/cc/52/784fca01997448402695e3d0356d2f9c814d545bbcdef45d26
Building wheel for ephem (setup.py) ... error
ERROR: Complete output from command /usr/bin/python3.7 -u -c 'import setuptools, tokenize;file='"'"'/tmp/pip-install-_whfedar/ephem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ic6z2ivs --python-tag cp37:
ERROR: running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.7
creating build/lib.linux-x86_64-3.7/ephem
copying ephem/cities.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/init.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/stars.py -> build/lib.linux-x86_64-3.7/ephem
creating build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_stars.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_dates.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_constants.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_satellite.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_jpl.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_244811.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_cities.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_rst.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno_equinoxes.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/init.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_angles.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_bodies.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_github_issues.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_locales.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_observers.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_236872.py -> build/lib.linux-x86_64-3.7/ephem/tests
creating build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/faq.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/angle.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/newton.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/coordinates.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/catalogs.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/reference.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/index.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/date.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/tutorial.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/CHANGELOG.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/radec.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/rise-set.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/examples.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/quick.rst -> build/lib.linux-x86_64-3.7/ephem/doc
creating build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/oberon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/mars.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/phobos.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/uranus.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/saturn.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/hyperion.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/europa.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
creating build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_antares.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/moon_phases.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_mercury.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_rigel.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
running build_ext
building 'ephem._libastro' extension
creating build/temp.linux-x86_64-3.7
creating build/temp.linux-x86_64-3.7/extensions
creating build/temp.linux-x86_64-3.7/libastro-3.7.6
creating build/temp.linux-x86_64-3.7/extensions/data
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ilibastro-3.7.6 -I/usr/include/python3.7m -c extensions/_libastro.c -o build/temp.linux-x86_64-3.7/extensions/_libastro.o
x86_64-linux-gnu-gcc: error trying to exec 'cc1': execvp: No such file or directory
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

ERROR: Failed building wheel for ephem
Running setup.py clean for ephem
Successfully built holidays
Failed to build fbprophet ephem
Installing collected packages: ephem, convertdate, holidays, setuptools-git, fbprophet
Running setup.py install for ephem ... error
ERROR: Complete output from command /usr/bin/python3.7 -u -c 'import setuptools, tokenize;file='"'"'/tmp/pip-install-_whfedar/ephem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-fb7atl5z/install-record.txt --single-version-externally-managed --compile:
ERROR: running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.7
creating build/lib.linux-x86_64-3.7/ephem
copying ephem/cities.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/init.py -> build/lib.linux-x86_64-3.7/ephem
copying ephem/stars.py -> build/lib.linux-x86_64-3.7/ephem
creating build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_stars.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_dates.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_constants.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_satellite.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_jpl.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_244811.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_cities.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_rst.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno_equinoxes.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/init.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_angles.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_usno.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_bodies.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_github_issues.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_locales.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_observers.py -> build/lib.linux-x86_64-3.7/ephem/tests
copying ephem/tests/test_launchpad_236872.py -> build/lib.linux-x86_64-3.7/ephem/tests
creating build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/faq.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/angle.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/newton.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/coordinates.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/catalogs.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/reference.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/index.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/date.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/tutorial.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/CHANGELOG.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/radec.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/rise-set.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/examples.rst -> build/lib.linux-x86_64-3.7/ephem/doc
copying ephem/doc/quick.rst -> build/lib.linux-x86_64-3.7/ephem/doc
creating build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/oberon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/mars.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/phobos.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/uranus.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/saturn.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/hyperion.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/europa.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
copying ephem/tests/jpl/jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/jpl
creating build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_antares.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/moon_phases.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/riset_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_mercury.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_jupiter.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/astrom_neptune.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/risettran_rigel.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_deneb.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/appgeo_moon.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
copying ephem/tests/usno/apptopo_sun.txt -> build/lib.linux-x86_64-3.7/ephem/tests/usno
running build_ext
building 'ephem._libastro' extension
creating build/temp.linux-x86_64-3.7
creating build/temp.linux-x86_64-3.7/extensions
creating build/temp.linux-x86_64-3.7/libastro-3.7.6
creating build/temp.linux-x86_64-3.7/extensions/data
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ilibastro-3.7.6 -I/usr/include/python3.7m -c extensions/_libastro.c -o build/temp.linux-x86_64-3.7/extensions/_libastro.o
x86_64-linux-gnu-gcc: error trying to exec 'cc1': execvp: No such file or directory
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
----------------------------------------
ERROR: Command "/usr/bin/python3.7 -u -c 'import setuptools, tokenize;file='"'"'/tmp/pip-install-_whfedar/ephem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-fb7atl5z/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-_whfedar/ephem/

@bletham
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bletham commented May 28, 2019

One thing to note is that the pystan install will complete successfully even if it is not functional and compiling Stan programs fails. It does seem that PyStan is still not working (but you can try the little test program again to be sure). I have pretty limited ability to debug pystan install issues. Make sure you have python development tools installed (apt-get install python3-dev), but otherwise I think I'll have to refer you to the Pystan issue tracker for help.

@bletham bletham closed this as completed Jun 14, 2019
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@bletham @supreme-core