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AstatineTech
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09:31
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💻 Democratizing Snippet Management (macOS/Win/Linux)
Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
parallel-fastq-dump implementation in bash script
R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
MACA: Marker-based automatic cell-type annotation for single cell expression data
Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses
A plugin for Microsoft.EntityFrameworkCore to support repository, unit of work patterns, multiple database with distributed transaction supported, and MySQL multiple databases/tables sharding suppo…
nf-core / smartseq2
Forked from icbi-lab/smartseq2_pipelineA pipeline for processing single cell RNA-seq data generated with the SmartSeq2 protocol.
BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data
A scanpy extension to analyse single-cell TCR and BCR data.
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene reg…
🎯 ChIP peak Annotation, Comparison and Visualization
A quality control analysis tool for high throughput sequencing data
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
此项目是机器学习(Machine Learning)、深度学习(Deep Learning)、NLP面试中常考到的知识点和代码实现,也是作为一个算法工程师必会的理论基础知识。
A SingleCell RNASeq pre-processing snakemake workflow
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation
Paper and implementation of UNet-related model.
The Elements of Statistical Learning (ESL)的中文翻译、代码实现及其习题解答。
Reading list for research topics in multimodal machine learning