Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Improve API for Julia 1.0.2 using keyword arguments #47

Closed
2 tasks done
diegozea opened this issue Dec 10, 2018 · 2 comments
Closed
2 tasks done

Improve API for Julia 1.0.2 using keyword arguments #47

diegozea opened this issue Dec 10, 2018 · 2 comments

Comments

@diegozea
Copy link
Owner

diegozea commented Dec 10, 2018

  • deprecate @residue... macros and use kw args instead
  • make map...freq simpler with kw args and default values
@diegozea
Copy link
Owner Author

MIToS v2.20.0 has deprecated the @residues macro and the residues function in favor of select_residues that use keyword arguments.

@diegozea
Copy link
Owner Author

diegozea commented Jul 1, 2024

MIToS v.2.22.0 makes easy the API of the functions defined in the Information module by using keyword arguments and sensible defaults. In particular, it now defines the mapfreq function and uses it to define information measures, such as shannon_entropy, mutual_information, on multiple sequence alignments.

@diegozea diegozea closed this as completed Jul 1, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

1 participant