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Which set of GSEA data is equivalent to modzs.gctx #5
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I think this issue is similar to #3. The
While the LINCS L1000 team no longer distributes this file at lincscloud, I believe it does contain the most recent differential expression data available, which is now distributed via GEO. See the comment at #4 (comment):
It is possible that clue.io has an updated modzs file, although I don't think this resource is openly licensed. |
Thank you: this is very helpful. I really appreciate all your help! Best, |
Hello Daniel,
I am in the process of creating auto-update scripts for all the nodes with hetio, and in order to do that, I will need a copy of the most up-to-date modzs.gctx file. I know that GSEA has some LINCS datasets in there, and I was curious which files best correspond to the modzs file that you used in this repository. Any input or feedback would be greatly appreciated. Thank you!
Best,
Krish
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