numpy >=1.20
matplotlib >=3.1.1,<3.9
intervaltree >=2.1.0
pybigwig >=0.3.16
future >=0.17.0
hicmatrix >=15
pysam >=0.14
gffutils >=0.9
pybedtools >=0.8.1
tqdm >=4.20
bx-python >=0.8.13
pyfaidx >=0.1.3