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You could in theory do that, by making a BED file with 1 entry for each chromosome. However the boxes won't be scaled to the length of the chromosome, since that makes direct comparison more difficult (you could leave X kb on each end unscaled, though, depending on what you want to show).
Hello!
I want to know the method of drawing metaplot like this,the width of each box correlates with the chromosome length.
Thank you
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