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das2_srv_todo
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das2_srv_todo
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#!/usr/bin/env python
import sys
import os
import os.path
import optparse
import time
import codecs
import socket
import pwd
g_sConfPath = REPLACED_ON_BUILD
das2 = None # Namespace anchor for das2 module, loaded afte sys.path is set
# via the config file
# handle output, python 2/3 compatible
try:
unicode
except NameError:
unicode = str
def pout(item):
"""Write bytes or strings, in python 2 or 3
If input item is bytes, write them, if item is a unicode string encode as
utf-8 first"""
if sys.version_info[0] == 2:
if isinstance(item, unicode):
sys.stdout.write(item.encode('utf-8'))
else:
sys.stdout.write(item)
else:
if isinstance(item, unicode):
sys.stdout.buffer.write(item.encode('utf-8'))
else:
sys.stdout.buffer.write(item)
def perr(item):
"""Write bytes or strings, in python 2 or 3
If input item is bytes, write them, if item is a unicode string encode as
utf-8 first"""
if sys.version_info[0] == 2:
if isinstance(item, unicode):
sys.stderr.write(item.encode('utf-8'))
else:
sys.stderr.write(item)
else:
if isinstance(item, unicode):
sys.stderr.buffer.write(item.encode('utf-8'))
else:
sys.stderr.buffer.write(item)
##############################################################################
# A generic version reporting block
def stripSVNkey(s):
if s.find(':') == -1:
return s.strip(" $") + ": unknown"
else:
return s.strip(' $')
g_sRev = stripSVNkey("$Rev: 8605 $")
g_sURL = stripSVNkey("$URL: https://saturn.physics.uiowa.edu/svn/das2/servers/stable/pyserver/scripts/das2_srv_arbiter.in $")
g_sWho = stripSVNkey("$LastChangedBy: cwp $")
g_sWhen = stripSVNkey("$LastChangedDate: 2015-03-27 20:26:55 -0500 (Fri, 27 Mar 2015) $")
##############################################################################
# Get my config file, boiler plate that has to be re-included in each script
# since the location of the modules can be configured in the config file
def getConf():
if not os.path.isfile(g_sConfPath):
if os.path.isfile(g_sConfPath + ".example"):
perr(u"Move\n %s.example\nto\n %s\nto enable your site\n"%(
g_sConfPath, g_sConfPath))
else:
perr(u"%s is missing\n"%g_sConfPath)
return None
# Yes, the Das2 server config files can contain unicode characters
if sys.version_info[0] == 2:
fIn = codecs.open(g_sConfPath, 'rb', encoding='utf-8')
else:
fIn = open(g_sConfPath, 'r')
dConf = {}
nLine = 0
for sLine in fIn:
nLine += 1
iComment = sLine.find('#')
if iComment > -1:
sLine = sLine[:iComment]
sLine = sLine.strip()
if len(sLine) == 0:
continue
iEquals = sLine.find('=')
if iEquals < 1 or iEquals > len(sLine) - 2:
preLoadError(u"Error in %s line %d"%(g_sConfPath, nLine))
fIn.close()
return None
sKey = sLine[:iEquals].strip()
sVal = sLine[iEquals + 1:].strip(' \t\v\r\n\'"')
dConf[sKey] = sVal
fIn.close()
# As a finial step, inclued a reference to the config file itself
dConf['__file__'] = g_sConfPath
return dConf
##############################################################################
# Update sys.path, boiler plate code that has to be re-included in each script
# since config file can change module path
def setModulePath(dConf):
if 'MODULE_PATH' not in dConf:
perr(u"Set MODULE_PATH = /dir/containing/das2server_python_module")
return False
lDirs = dConf['MODULE_PATH'].split(os.pathsep)
for sDir in lDirs:
if os.path.isdir(sDir):
if sDir not in sys.path:
sys.path.insert(0, sDir)
return True
##############################################################################
def makeTask(sTask, lArgs):
"""Making generic job enteries, does not parse lArgs"""
lReq = ['']*7
lReq += lArgs
lReq[1] = 'das2_srv_todo'
lReq[2] = socket.gethostname()
if sys.platform.lower().startswith('win'):
lReq[5] = os.environ['USERNAME']
else:
lReq[5] = pwd.getpwuid( os.getuid() )[4]
rTime = time.time()
nMilli = int( (rTime - int(rTime))*1000 )
t = time.gmtime(rTime)
lReq[0] ='%s.%03d'%('%04d-%02d-%02dT%02d:%02d:%02d'%tuple(t[:6]),nMilli)
lReq[6] = "TASK_%s"%sTask.upper()
return '|'.join(lReq)
##############################################################################
# Job Templates
class JobTemplate(object):
def __init__(self):
self.sName = None
self.sSummary = None
self.sDesc = None
self.lArgs = []
self.dHelp = {}
self.lExamples = []
def validate(self):
pass
def args(self):
return self.lArgs
def summary(self, sArg=None):
if sArg == None:
return self.sSummary
else:
return self.dHelp[sArg.lower()]
def description(self):
return self.sDesc
def examples(self):
return self.lExamples
def name(self):
return self.sName
def args(self):
return self.lArgs
def getTask(self, lArgs):
"""Returns a task string from the arguments list, or raises ValueError
"""
pass
class CacheJob(JobTemplate):
def __init__(self):
JobTemplate.__init__(self)
self.sName = "cache"
self.sSummary = "generate pre-reduced dataset cache blocks"
self.lArgs = ['dataset','begin','end', 'level']
self.dHelp = {
'dataset':'The name of the dataset to cache',
'begin':'The starting time point of data to cache',
'end':'The ending time point of data to cache',
'level':"The cache resolution level index from the dataset's DSDF"
}
self.sDesc = \
""" Das2 PyServers are able to build a multi-resolution data cache. Data
are reduced in the time domain using the reducer specified in a dataset's
DSDF file. The default reducer just averages all measurements in a time
bin and then moves on to the next time bin and repeats the process. This
job type is used to trigger creation of a series of cache blocks covering
all times from BEGIN to END at a specified resolution LEVEL.
See Section 4 of the Das2 PyServer User's Reference for more information.
"""
self.lExamples = [
("Build a cache of Juno MAG data at cache level 2 over a 4 day range",
"juno/fgm/MagComponetsSCSE 2014-01-01 2014-01-05 2")
]
def getTask(self, lArgs):
if len(lArgs) != 4:
raise ValueError("Expected 4 arguments for CACHE jobs\n")
if len(lArgs[0].strip()) == 0 < lArgs[0][0] == '/':
raise ValueError("in 'dataset' argument '%s'"%lArgs[0])
try:
dt = das2.dastime.DasTime(lArgs[1].strip())
except ValueError as e:
raise ValueError("in 'begin' argument, %s\n"%str(e))
try:
dt = das2.dastime.DasTime(lArgs[2].strip())
except ValueError as e:
perr("in 'end' argument, %s\n"%str(e))
return makeTask('CACHE', lArgs)
##############################################################################
g_dTemplates = {
'cache': CacheJob()
}
##############################################################################
def _keyAndSumFmt(lKeys, sSep, nLineLen=80):
n1stCol = 5
for sKey in lKeys:
n1stCol = max(n1stCol, len(sKey))
n2ndCol = nLineLen - n1stCol - len(sSep)
sFmt = "%%-%ds%s%%-%ds"%(n1stCol, sSep, n2ndCol)
return (n1stCol, n2ndCol, sFmt)
def prnJobHelp(sProg, sJob):
tplt = g_dTemplates[sJob]
print("Task: %s"%tplt.name().upper())
print("Summary: %s"%tplt.summary())
print("")
lArgs = tplt.args()
(n1stCol, n2ndCol, sFmt) = _keyAndSumFmt(lArgs, " - ", 71)
print("Parameters:")
for i in range(0, len(lArgs)):
sInfo = sFmt%(lArgs[i], tplt.summary(lArgs[i]))
print("%4d) %s"%(i+1, sInfo))
print("")
print("Description:")
print(tplt.description())
lEx = tplt.examples()
if len(lEx) > 0:
if len(lEx) > 1:
print("Examples:")
else:
print("Example:")
for i in range(0, len(lEx)):
print(" %s:"%lEx[i][0])
print("")
print(" %s %s %s"%(sProg, tplt.name(), lEx[i][1]))
print("")
##############################################################################
# Print the various queue types. Started as a general function but since I
# have to be python 2.6 compatible and there is on OrderedDict in 2.6, it
# looks like having different functions simplifies the code at the expense of
# length.
def _prnList(lColWidths, lHeaders, llOutputs, sList):
if len(llOutputs) == 0:
perr("%s list contains no tasks\n"%sList)
return 0
lFmt = ["%%-%ds"%n for n in lColWidths]
lSep = ["-"*n for n in lColWidths]
sFmt = " ".join(lFmt)
print(sFmt%tuple(lHeaders))
print(" ".join(lSep))
for lOutput in llOutputs:
print(sFmt%tuple(lOutput))
def prnTodoQueue(broker):
lKeys = broker.keys('das2_todo')
llOutputs = []
lHeaders = ['Submitted On', 'Entered By', 'Job Type']
lColWidths = [len(s) for s in lHeaders]
if len(lKeys) > 0:
for sKey in lKeys:
lEntries = broker.lrange(sKey, 0, -1)
for sTask in lEntries:
lTask = sTask.split('|')
nJobArgs = len(lTask) - 7
while len(lColWidths) < nJobArgs+3:
lHeaders.append('Param %d'%(len(lColWidths) - 3 + 1))
lColWidths.append(len(lHeaders[-1]))
lOutput = [lTask[0], lTask[1],
lTask[6].lower().replace('task_','') ]
lOutput += lTask[7:]
for i in range(0, len(lOutput)):
if len(lOutput[i]) > lColWidths[i]:
lColWidths[i] = len(lOutput[i])
llOutputs.append(lOutput)
_prnList(lColWidths, lHeaders, llOutputs, 'das2_todo')
return 0
def prnWorkingQueues(broker):
lKeys = broker.keys('das2_working_*')
llOutputs = []
lHeaders = ['Submitted On', 'Entered By', 'Job Type', 'Started On',
'Progress']
lColWidths = [len(s) for s in lHeaders]
nFixedHdrs = len(lHeaders)
if len(lKeys) > 0:
for sKey in lKeys:
lEntries = broker.lrange(sKey, 0, -1)
for sTask in lEntries:
lTask = sTask.split('|')
nJobArgs = (len(lTask) - 7) - 3
while len(lColWidths) < nJobArgs+nFixedHdrs:
iPos = 7 + len(lColWidths) - 5
lHeaders.insert(iPos, 'Param %d'%(len(lColWidths) - nFixedHdrs + 1))
lColWidths.insert(iPos, len(lHeaders[-1]))
lOutput = [lTask[0], lTask[1], lTask[-3], lTask[-1],
lTask[6].lower().replace('task_','') ]
lOutput += lTask[7:-3]
for i in range(0, len(lOutput)):
if len(lOutput[i]) > lColWidths[i]:
lColWidths[i] = len(lOutput[i])
llOutputs.append(lOutput)
_prnList(lColWidths, lHeaders, llOutputs, 'das2_working_*')
return 0
def prnDoneQueue(broker):
lKeys = broker.keys('das2_finished')
llOutputs = []
lHeaders = ['Status','Submitted On', 'Entered By', 'Job Type', 'Finished On']
lColWidths = [len(s) for s in lHeaders]
nFixedHdrs = len(lHeaders)
if len(lKeys) > 0:
for sKey in lKeys:
lEntries = broker.lrange(sKey, 0, -1)
for sTask in lEntries:
lTask = sTask.split('|')
nJobArgs = len(lTask) - (7 + 4)
while len(lColWidths) < nJobArgs+nFixedHdrs:
iPos = 7 + len(lColWidths) - 5
nParamNo = len(lColWidths) - nFixedHdrs + 1
sHdr = 'Param %d'%nParamNo
lHeaders.insert(iPos, sHdr)
lColWidths.append(iPos, len(sHdr))
if lTask[-1] == '0':
sStatus = "OKAY"
else:
sStatus = "ERROR"%lTask[-1]
lOutput = [sStatus, lTask[0], lTask[1], lTask[-2],
lTask[6].lower().replace('task_','') ]
lOutput += lTask[7:-4]
for i in range(0, len(lOutput)):
if len(lOutput[i]) > lColWidths[i]:
lColWidths[i] = len(lOutput[i])
llOutputs.append(lOutput)
_prnList(lColWidths, lHeaders, llOutputs, 'das2_finished')
return 0
##############################################################################
class StderrLog(object):
def write(self, sThing):
sys.stderr.write("%s\n"%sThing)
##############################################################################
# The program need way better help than the default OptionParser can provide
class MyOptParse(optparse.OptionParser):
def print_help(self, file=None):
if file == None:
file = sys.stdout
file.write("""
NAME:
das2_srv_todo - Inject tasks into a Das2 PyServer work queue
SYNOPSIS:
das2_srv_todo [options] help TASK
das2_srv_todo [options] TASK ARG1 ARG2 ARG3 ...
DESCRIPTION:
das2_srv_todo adds tasks of type TASK to the the redis server hosting a Das2
PyServer work queue. The default implementation of the server uses a ReDis
server (https://redis.io/) to host the queue. Using Redis allows multiple
processes may insert tasks at the same time without corrupting the task
queue. Tasks within the queue are represented as simple strings with pipe,
'|', delimited fields. This program appends new strings to the 'das2_todo'
list within the Redis server. The companion program das2_srv_arbiter
handles retreiving task strings from the list and running the requested
processing jobs. Task strings are moved off of the das2_todo list as they
are finished.
""")
file.write("""
OPTIONS:
--version Show the program's version information and exit
-h, --help Print this general help message and exit
-c FILE, --config=FILE
Use FILE as the Das2 Server conifguration instead of the
compiled in default.
-g, --generic
Do not parse the task arguments. Instead prepend 'TASK_' to
the task name, combine the task name and all the given arguments
using pipe, '|', character, then prepend the general job
information arguments and push the task string onto the work
list. Generic tasks are not verified before queuing.
-t, --list-todo
List all tasks waiting for processing in the Das2 PyServer's
queue and return. Task arguments are ignored.
-w, --list-working
List all tasks currently in process on the Das2 PyServer's
queue and return. Task arguments are ignored.
-d, --list-done
List all tasks on the finished list in the Das2 PyServer's
queue and return. Task arguments are ignored.
""")
file.write("""
TASKS:
The following task types are understood by das2_srv_todo and will be
verified before insertion into the server's todo queue:
""")
lTasks = list(g_dTemplates.keys())
lTasks.sort()
for sTask in lTasks:
file.write(" '%s' - %s\n"%(sTask, g_dTemplates[sTask].sSummary))
if len(lTasks) == 1:
file.write("\n (no other task types supported at this time)\n")
file.write("""
Type:
das2_srv_todo TASK help
To get more information on each type of TASK. In addition generic tasks
may be inserted into the queue using the -g option above.
""")
file.write("""
FILES:
Each Das2 PyServer is defined by a single configuration file. By default
the configuration data for this program are taken from:
%s
SEE ALSO:
das2_srv_arbiter, das2_cache_rdr, qstream_cache_rdr, and the 'Das2 PyServer
Reference Guide' at https://das2.org/PyServer-RG.pdf .
"""%g_sConfPath)
#End print_help
##############################################################################
def main(argv):
global das2
sUsage="das2_srv_todo [options] [help] [TASK ARG1 ARG2 ARG3 ...]"
sProg = "das2_srv_todo"
# Would use argparse here, but it's only avaliable in python 2.7 and up
psr = MyOptParse(
prog=sProg, usage=sUsage,
version=" \n".join( [g_sRev, g_sWho, g_sWhen, g_sURL] )
)
psr.add_option('-c', '--config', dest="sConfig", default=g_sConfPath)
psr.add_option('-g','--generic', dest="bGeneric", action="store_true",
default=False)
psr.add_option('-t','--list-todo', dest="bListTodo", action="store_true",
default=False)
psr.add_option('-w', '--list-working', dest="bListWorking",
action="store_true", default=False)
psr.add_option('-d', '--list-done', dest="bListDone", action="store_true",
default=False)
(opts, lArgs) = psr.parse_args(argv[1:])
# We can handle help without reading the config.
if not opts.bListTodo and not opts.bListWorking and not opts.bListDone:
if len(lArgs) == 0:
print("Type '%s help' for usage."%sProg)
return 0
elif len(lArgs) == 1:
if lArgs[0].lower() == 'help':
psr.print_help(sys.stdout)
return 0
else:
if lArgs[0].lower() == 'help':
if lArgs[1].lower() in g_dTemplates:
prnJobHelp(sProg, lArgs[1].lower())
return 0
else:
perr("ERROR: Task type '%s' is unknown. "%lArgs[1])
perr("(Run %s -h to get a list of known task types)\n"%sProg)
return 13
if lArgs[0].lower() not in g_dTemplates:
perr("ERROR: Job type '%s' is unknown. "%lArgs[1])
perr("(Run %s with no parameters to get a list of know job types)\n"%sProg)
return 13
perr("Server definition: %s\n"%opts.sConfig)
dConf = getConf()
if dConf == None:
return 17
# Set the system path
if not setModulePath(dConf):
return 18
# Load the das2 module
try:
das2 = __import__('das2', globals(), locals(), [], 0)
except ImportError as e:
perr("Error importing module 'das2'\r\n: %s\n"%(str(e)))
return 19
# Load the das2server.util module
try:
mTmp = __import__('das2server', globals(), locals(), ['util'], 0)
except ImportError as e:
perr(u"Error importing module 'das2server'\r\n: %s\n"%(str(e)))
return 19
try:
U = mTmp.util
except AttributeError:
perr(u'No module named das2server.util under %s\n'%dConf['MODULE_PATH'])
return 20
fLog = StderrLog()
broker = U.task.getBroker(fLog, dConf)
if broker == None:
return 21
if opts.bListTodo:
return prnTodoQueue(broker)
if opts.bListWorking:
return prnWorkingQueues(broker)
if opts.bListDone:
return prnDoneQueue(broker)
tplt = g_dTemplates[lArgs[0]]
try:
sTask = tplt.getTask(lArgs[1:])
except ValueError as e:
perr("ERROR: %s"%str(e))
return 13
perr("Adding task '%s'\n"%sTask)
try:
broker.lpush('das2_todo', sTask)
except ServerError as e:
perr("ERROR: Job broker error, %s.\n"%str(e))
return 21
return 0
##############################################################################
if __name__ == '__main__':
main(sys.argv)