This script is for calculating the median of normalized variance from a Perseus matrix table.
How to run:
args[1] - Perseus matrix table of proteinGroup table
args[2] - Row number of the annotation for sample groups
args[3] - Row number of the annotation of Type which shows E, N, C and T
args[4] - Row number of the first row of intensity values
EX: Rscript MedianVar.R proteinGroup_Perseus.txt 4 1 5