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28 stars written in Go
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Production-Grade Container Scheduling and Management

Go 110,350 39,472 Updated Oct 10, 2024

🌸 A command-line fuzzy finder

Go 64,445 2,378 Updated Oct 7, 2024

Packer is a tool for creating identical machine images for multiple platforms from a single source configuration.

Go 15,060 3,326 Updated Oct 10, 2024

Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON

Go 8,916 216 Updated Oct 10, 2024

json incremental digger

Go 6,873 155 Updated Mar 25, 2024

a high-performance, POSIX-ish Amazon S3 file system written in Go

Go 5,182 520 Updated Jul 18, 2024

(cross-platform) Java Version Manager

Go 2,992 194 Updated Mar 14, 2024

Amazon Elastic Container Service Agent

Go 2,078 608 Updated Oct 10, 2024

Small Clojure interpreter, linter and formatter.

Go 1,637 67 Updated Sep 14, 2024

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Go 1,299 158 Updated Oct 8, 2024

Fast, concurrent, streaming access to Amazon S3, including gof3r, a CLI. https://godoc.org/github.com/rlmcpherson/s3gof3r

Go 1,145 181 Updated Aug 28, 2021

you're invited to a data party!

Go 1,105 66 Updated Aug 10, 2022

Robust, flexible and resource-efficient pipelines using Go and the commandline

Go 1,069 70 Updated Aug 14, 2024

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

Go 1,005 84 Updated Sep 4, 2024

A Go package for engineering organisms.

Go 672 72 Updated Sep 10, 2024

An open source platform for managing and analyzing biomedical big data

Go 379 116 Updated Oct 10, 2024

annotate a VCF with other VCFs/BEDs/tabixed files

Go 360 56 Updated Nov 23, 2023

elPrep: a high-performance tool for analyzing sequence alignment/map files in sequencing pipelines.

Go 286 42 Updated Jun 2, 2023

structural variant calling and genotyping with existing tools, but, smoothly.

Go 233 21 Updated Jun 17, 2024

goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

Go 215 25 Updated Sep 27, 2024

Lollipop-style mutation diagrams for annotating genetic variations.

Go 180 69 Updated Sep 20, 2024

workflow and resource management system for bioinformatics data analysis

Go 69 21 Updated Oct 29, 2020

package manager for datasets

Go 59 1 Updated Mar 18, 2015

sort genomic data

Go 35 1 Updated May 26, 2020

Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

Go 30 5 Updated Nov 14, 2018

A package for simulating RNA-seq library preparation with parameter estimation

Go 22 7 Updated Mar 3, 2014

Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL

Go 22 5 Updated Dec 12, 2023

extract SV signal from a BAM

Go 11 1 Updated Jul 26, 2018