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Problem generating SNPpositions for GRCh38 #92
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The data is available on our FTP site: ftp:https://ftp.sanger.ac.uk/pub/cancer/dockstore/human/GRCh38_hla_decoy_ebv/ Specifically this file
We need to document this |
Thanks for the prompt response. I am downloading the file you indicated right now. |
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There appears to be no "E_Multiple_observations" entries for GRCh38 1000genomes phase3 vcfs. I checked phase3 vcfs for release91 and release99 from ENSEMBL.
Is there an alternative method to generate the SNP positions for GRCh38 since I want to use ascatNGS for GRCh38 aligned bams.
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