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Something went wrong with making the order bloblot image and exited. #537

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Tongling1013 opened this issue Feb 22, 2024 · 1 comment
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@Tongling1013
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hello,

I have issues when I used the metawrap blobology -a sequence/PRJNA891685/ASSEMBLY/final_assembly.fasta -t 64 -o sequence/PRJNA891685/BLOBOLOGY1 --bins sequence/PRJNA891685/BIN_REFINEMENT/metawrap_80_10_bins sequence/PRJNA891685/CLEAN_READS/SRR*fastq. Something went wrong with making the order bloblot image and exited. In the error out ,it said
Wed Feb 21 09:17:25 2024 - Reading sequence/PRJNA891685/BLOBOLOGY1/SRR24791474.bowtie2.bam ... DONE
Wed Feb 21 09:17:25 2024 - Making len gc cov taxon annotation data file sequence/PRJNA891685/BLOBOLOGY1/final_assembly.fasta.txt for R ...
Wed Feb 21 09:17:25 2024 - Making len gc cov taxon annotation data file sequence/PRJNA891685/BLOBOLOGY1/final_assembly.fasta.txt for R ... DONE
Rscript execution error: No such file or directory

real 24m16.979s
user 756m40.806s
sys 50m16.371s
can you help me figure out what's wrong with this and how can I fix it, thank you so much.

Tongling

@Tongling1013
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I figured it out, I forgot to load module R.

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