Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Installation of metWRAP #523

Open
ramnageena11 opened this issue Oct 20, 2023 · 2 comments
Open

Installation of metWRAP #523

ramnageena11 opened this issue Oct 20, 2023 · 2 comments

Comments

@ramnageena11
Copy link

Hi,
I am new to BigData analysis.
Could you explain a bit more on Steps: 2, 3 and 4.
What does mean by configuring path with database?

Till now I have cloned metWRAP.
Downloading databases in ..../home/Document/Databases/

Once downloaded.. how should I move forward?

Thanks
rgds
RNS

@ramnageena11
Copy link
Author

Hi,
Pls explain little bit following. How to perform point no. 2 and 3?
regarding no 3 do i need to clone the metaWRAP in new env or no? I have cloned the metaWRAP in home.

  1. Make metaWRAP executable by adding yourpath/metaWRAP/bin/ directory to to your $PATH. Either add the line PATH=yourpath/metaWRAP/bin/:$PATH to your ~/.bash_profile script, or copy over the contents of yourpath/metaWRAP/bin/ into a location already in your $PATH (such as /usr/bin/ or /miniconda2/bin/).
  2. (Optional but recommended) Make a new conda environment to install and manage all dependancies:

@bioinformaticsporter
Copy link

How to download all the dependencies in 2.7python environment, please ask me, I am also the same cloned software

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants