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Add metadata about examples following OMEX Metadata guidelines #41
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Instructions
Three additional examples include the |
@bilalshaikh42 above is an outline for Ryann. I've worked through a couple of OMEX files as examples. |
@Ryannjordan I finished this up. I'll get these examples deployed by tomorrow. You can see the corrections I made in the commit history. |
OMEX Meta guidelines: https://biosimulators.dev/conventions/metadata
Complete example: https://github.com/biosimulators/Biosimulators_utils/blob/dev/tests/fixtures/omex-meta/biosimulations-with-file-annotations.rdf
sbml-core/
Caravagna-J-Theor-Biol-2010-tumor-suppressive-oscillations
Ciliberto-J-Cell-Biol-2003-morphogenesis-checkpoint-continuous
Ciliberto-J-Cell-Biol-2003-morphogenesis-checkpoint-Felhberg
Edelstein-Biol-Cybern-1996-Nicotinic-excitation
Parmar-BMC-Syst-Biol-2017-iron-distribution
Szymanska-J-Theor-Biol-2009-HSP-synthesis
Tomida-EMBO-J-2003-NFAT-translocation
Varusai-Sci-Rep-2018-mTOR-signaling-LSODA-LSODAR-SBML
Vilar-PNAS-2002-minimal-circardian-clock
Vilar-PNAS-2002-minimal-circardian-clock-continuous
(metadata is the same asVilar-PNAS-2002-minimal-circardian-clock
)Vilar-PNAS-2002-minimal-circardian-clock-discrete-NRM
(metadata is the same asVilar-PNAS-2002-minimal-circardian-clock
)Vilar-PNAS-2002-minimal-circardian-clock-discrete-SSA
(metadata is the same asVilar-PNAS-2002-minimal-circardian-clock
)sbml-fbc/
Escherichia-coli-core-metabolism
sbml-qual/
Chaouiya-BMC-Syst-Biol-2013-EGF-TNFa-signaling
cellml/
Lorenz-system
neuroml-lems/
Hodgkin-Huxley-cell-CVODE
Hodgkin-Huxley-cell-Euler
(annotation will be the same as forHodgkin-Huxley-cell-CVODE
)bngl/
Dolan-PLoS-Comput-Biol-2015-NHEJ
test-bngl
smoldyn/
Lotka-Volterra
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