Commits

Commits on Mar 19, 2020

added RMSD visualization
berylgithub
committedMar 19, 2020

Commits on Feb 18, 2020

added 16 angstrom model evaluation
berylgithub
committedFeb 18, 2020

Commits on Feb 12, 2020

added permutation importance calculation
berylgithub
committedFeb 12, 2020

Commits on Feb 5, 2020

added new visu framework for different cutoff parameter
berylgithub
committedFeb 5, 2020

Commits on Jan 16, 2020

added logic to stop parser when end model is found
berylgithub
committedJan 16, 2020

Commits on Jan 14, 2020

added inference feature calculation
berylgithub
committedJan 14, 2020
added PC-PC, PC-CytF, and 4azu inference
berylgithub
committedJan 14, 2020
added feature extraction scheme
berylgithub
committedJan 14, 2020
added main tests
berylgithub
committedJan 14, 2020
added verbose log
berylgithub
committedJan 14, 2020
bugfix invalid var nam
berylgithub
committedJan 14, 2020
completed feature calculator functions (no tests yet)
berylgithub
committedJan 14, 2020
added configuration file
berylgithub
committedJan 14, 2020
added features-calculator
berylgithub
committedJan 14, 2020
checkpoint 14012019
berylgithub
committedJan 14, 2020

Commits on Jan 13, 2020

modularized custom pdb functions
berylgithub
committedJan 13, 2020

Commits on Dec 23, 2019

added short feature description
berylgithub
committedDec 23, 2019
visualization for combined-hydrophobics-acids features
berylgithub
committedDec 23, 2019
added dataset combiner
berylgithub
committedDec 23, 2019
added training scheme for dataset with hydrophobics-acids feature
berylgithub
committedDec 23, 2019
added another parser for xyz misalignment bug
berylgithub
committedDec 23, 2019
added note for parser bugs
berylgithub
committedDec 23, 2019
added parser for PDB (x,y,z) misalignment bug
berylgithub
committedDec 23, 2019
added data processor for hydrophobic and acid CAs
berylgithub
committedDec 23, 2019

Commits on Dec 16, 2019

added k-fold models visualization
berylgithub
committedDec 16, 2019
added k-fold valditations
berylgithub
committedDec 16, 2019
added k-fold validations
berylgithub
committedDec 16, 2019

Commits on Dec 9, 2019

added baseline trainer
berylgithub
committedDec 9, 2019

Commits on Dec 3, 2019

fixed y-z broken coordinates
berylgithub
committedDec 3, 2019

Commits on Dec 2, 2019

fixed broken data coordinate from PDB
berylgithub
committedDec 2, 2019
added parallel processing framework
berylgithub
committedDec 2, 2019

Commits on Nov 30, 2019

added multiprocess data sampling
berylgithub
committedNov 30, 2019

Commits on Nov 28, 2019

added multiprocessing pipeline
berylgithub
committedNov 28, 2019

Commits on Nov 25, 2019

added complex data x-vector calculator, and fixed PDB data spacing bugs
berylgithub
committedNov 25, 2019

Commits on Nov 22, 2019

completed y data calculator
berylgithub
committedNov 22, 2019