{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":475404074,"defaultBranch":"main","name":"SpaTalk","ownerLogin":"ZJUFanLab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-03-29T11:07:05.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/53822310?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1657247269.926257","currentOid":""},"activityList":{"items":[{"before":"8ee10427aeb799d059628192e66a4426e255173c","after":"a650a00f35f7497aad5781c4ca4d1e8219b15bc3","ref":"refs/heads/main","pushedAt":"2024-06-14T03:53:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update README.md\n\nCompatible with Seurat 5","shortMessageHtmlLink":"Update README.md"}},{"before":"df5b507574ec84c79f7717e5d091d9efbcf4d37a","after":"8ee10427aeb799d059628192e66a4426e255173c","ref":"refs/heads/main","pushedAt":"2024-06-14T03:46:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update utils.R\n\n#40\ncompatible with Seurat 5","shortMessageHtmlLink":"Update utils.R"}},{"before":"28fe6a148d080b159666bbf20f9e2b262f0b90ca","after":"df5b507574ec84c79f7717e5d091d9efbcf4d37a","ref":"refs/heads/main","pushedAt":"2023-06-30T11:21:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"dc511ac9878d4d8fdddd92caa287bb5cab259a12","after":"28fe6a148d080b159666bbf20f9e2b262f0b90ca","ref":"refs/heads/main","pushedAt":"2023-05-15T15:48:34.820Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"5f353be76d49e88a47f6b1454a0be1dc8412caea","after":"dc511ac9878d4d8fdddd92caa287bb5cab259a12","ref":"refs/heads/main","pushedAt":"2023-04-10T17:28:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update methods.R\n\nfix the bug\n```\nError in {: task 1 failed - \"invalid character indexing\"\nTraceback:\n\n1. dec_celltype(object = obj1, sc_data = as.matrix(log2(ref_data_counts_new +\n . 1)), sc_celltype = sc_celltype, if_use_normalize_data = F,\n . if_use_hvg = F, use_n_cores = 8, )\n2. .generate_newmeta_cell(newmeta, st_ndata, sc_ndata, sc_celltype,\n . iter_num, n_cores, if_doParallel)\n3. foreach::foreach(i = 1:length(newmeta_spotname), .combine = \"rbind\",\n . .packages = \"Matrix\", .export = \".generate_newmeta_spot\") %dopar%\n . {\n . spot_name <- newmeta_spotname[i]\n . .generate_newmeta_spot(spot_name, newmeta, st_ndata,\n . sc_ndata, sc_celltype, iter_num)\n . }\n4. e$fun(obj, substitute(ex), parent.frame(), e$data)\n```","shortMessageHtmlLink":"Update methods.R"}},{"before":"61dacb9b1dd3f115ead84cb3b791c8f39f5e347a","after":"5f353be76d49e88a47f6b1454a0be1dc8412caea","ref":"refs/heads/main","pushedAt":"2023-04-10T17:19:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update utils.R\n\nfix #36","shortMessageHtmlLink":"Update utils.R"}},{"before":"b4958b5d9d95be54a713204a175828062f25f815","after":"61dacb9b1dd3f115ead84cb3b791c8f39f5e347a","ref":"refs/heads/main","pushedAt":"2023-04-10T16:47:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update methods.R","shortMessageHtmlLink":"Update methods.R"}},{"before":"2cd1fcba88180111a6c2a62ecc582fd5bb47f316","after":"b4958b5d9d95be54a713204a175828062f25f815","ref":"refs/heads/main","pushedAt":"2023-04-10T07:44:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"fix the error for `if_use_hvg = TRUE`\n\nfix the bug for `if_use_hvg = TRUE`\n```\nError in intI(i, n = x@Dim[1], dn[[1]], give.dn = FALSE) :\n invalid character indexing\n```","shortMessageHtmlLink":"fix the error for if_use_hvg = TRUE"}},{"before":"e1e14cfc2ac8b6cfa7616afadd3125d612a6e754","after":"2cd1fcba88180111a6c2a62ecc582fd5bb47f316","ref":"refs/heads/main","pushedAt":"2023-03-07T09:21:08.976Z","pushType":"push","commitsCount":1,"pusher":{"login":"multitalk","name":"Shao, Xin","path":"/multitalk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/43984681?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEZQ3qDwA","startCursor":null,"endCursor":null}},"title":"Activity ยท ZJUFanLab/SpaTalk"}