Workflow Description Language (WDL) for rmats2sashimiplot rmats2sashimiplot.wdl is a WDL (https://openwdl.org) implementation of rmats2sashimiplot Run on AnVIL https://anvil.terra.bio Create a new workflow using the AnVIL website and paste or upload rmats2sashimiplot.wdl Run with cromwell https://github.com/broadinstitute/cromwell Create an input config file java -jar "${WOMTOOL_JAR}" inputs --optional-inputs true rmats2sashimiplot.wdl > rmats2sashimiplot_inputs.json Edit rmats2sashimiplot_inputs.json Validate java -jar "${WOMTOOL_JAR}" validate --inputs rmats2sashimiplot_inputs.json rmats2sashimiplot.wdl Run java -jar "${CROMWELL_JAR}" run --inputs rmats2sashimiplot_inputs.json rmats2sashimiplot.wdl