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Commits on Nov 20, 2023

• Add CellChat v2 protocol https://doi.org/10.1101/2023.11.05.565674

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Commits on Nov 15, 2023

• Add CellPhoneDB v5 update

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Commits on Oct 30, 2023

• Add https://github.com/OmicsML/awesome-deep-learning-single-cell-papers

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Commits on Oct 27, 2023

• Add Multi-tissue human single-cell atlas

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Commits on Oct 11, 2023

• Add https://github.com/theislab/neural_organoid_atlas

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Commits on Oct 7, 2023

• Add SCimilarity https://github.com/Genentech/scimilarity

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Commits on Sep 29, 2023

• Update licenseshield

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Commits on Sep 23, 2023

• Add https://github.com/TheJacksonLaboratory/STQ

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Commits on Jul 21, 2023

• Add https://github.com/smorabit/hdWGCNA

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Commits on Jul 15, 2023

• Add https://github.com/TencentAILabHealthcare/scBERT

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Commits on Jul 14, 2023

• Add https://github.com/bowang-lab/scGPT

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Commits on Jul 10, 2023

• Add 10x Xenium Human Breast Tumors technology and data, https://www.10xgenomics.com/products/xenium-in-situ/human-breast-dataset-explorer

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• Add https://github.com/QihuangZhang/CeLEry

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Commits on Jul 9, 2023

• Add https://github.com/TencentAILabHealthcare/scTranslator

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Commits on Jul 8, 2023

• Add https://www.cellchat.org/

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Commits on Jul 2, 2023

• Add https://github.com/YosefLab/Hotspot

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Commits on Jun 12, 2023

• Add https://bioconductor.org/packages/SpatialDecon/

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Commits on Jun 8, 2023

• Add CosMx https://nanostring.com/products/cosmx-spatial-molecular-imager/ffpe-dataset/

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Commits on Jun 6, 2023

• Add Kana's JOSS paper, https://www.jkanche.com/kana/, https://doi.org/10.1101/2022.03.02.482701

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Commits on May 27, 2023

• Add https://github.com/scverse/spatialdata-notebooks)

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Commits on May 9, 2023

• Add https://github.com/AltAnalyze/cellHarmony-Align

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Commits on May 8, 2023

• Add https://github.com/MSingerLab/COMETSC

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• Add https://github.com/salzmanlab/SICILIAN

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Commits on May 1, 2023

• Add https://cb.csail.mit.edu/cb/scanorama/

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Commits on Apr 27, 2023

• Add https://github.com/CostaLab/MOJITOO

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Commits on Apr 8, 2023

• Add scRNA-seq best practices paper, https://doi.org/10.1038/s41576-023-00586-w

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Commits on Feb 23, 2023

• Add CELLxGENE https://cellxgene.cziscience.com/

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Commits on Feb 14, 2023

• Add https://www.sc-best-practices.org

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Commits on Jan 24, 2023

• Add https://snap.stanford.edu/stellar/

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Commits on Dec 19, 2022

• Add https://crazyhottommy.blogspot.com/2022/12/23-tools-to-work-with-single-cell.html

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Commits on Dec 14, 2022

• Add https://github.com/jbergenstrahle/STUtility

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Commits on Dec 13, 2022

• Add https://github.com/omicsCore/scTyper

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• Add https://github.com/msraredon/Connectome

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• Add https://github.com/saezlab/liana

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• Add https://omnipathdb.org/

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