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tidygenomes Public
Forked from SWittouck/tidygenomesFunctions to import and process orthogroup data in a tidy way
R UpdatedNov 27, 2024 -
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SCARAP Public
Forked from SWittouck/SCARAPA toolkit for prokaryotic comparative genomics
Python GNU General Public License v3.0 UpdatedOct 23, 2024 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 3, 2024 -
mag Public
Forked from nf-core/magAssembly and binning of metagenomes
Nextflow MIT License UpdatedOct 3, 2024 -
VTOOL Public
Forked from mticlla/VTOOLVTool es una herramienta interactiva y amigable, co-diseñada por sus usuarios, para la exploración de perfiles microbianos y data asociada al estudio del microbiota vaginal.
R Creative Commons Attribution 4.0 International UpdatedAug 8, 2024 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedJul 26, 2024 -
GTDBTk-docker-cli Public
Forked from Ecogenomics/GTDBTkGTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
Python GNU General Public License v3.0 UpdatedJul 10, 2024 -
traitar3 Public
Forked from nick-youngblut/traitar3From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)
Python GNU General Public License v3.0 UpdatedJul 8, 2024 -
microbiome-workshop Public template
Forked from franzbischoff/rstudio_mybinder_envThis is a template environment, pre-configured to run Github Classroom assessments.
R UpdatedJun 20, 2024 -
kraken2 Public
Forked from DerrickWood/kraken2The second version of the Kraken taxonomic sequence classification system
C++ MIT License UpdatedJun 5, 2024 -
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cocpyth Public
Command line interface to generate Call of Cthulhu characters
Python MIT License UpdatedJan 22, 2024 -
phlogiston Public
Python package to work with fictional star chart data.
Python MIT License UpdatedSep 24, 2023 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedJun 21, 2023 -
taxprofiler Public
Forked from nf-core/taxprofilerHighly parallelised multi-taxonomic profiling of shotgun and long-read metagenomic data
Nextflow MIT License UpdatedJun 18, 2023 -
multidiffabundance Public
Forked from thiesgehrmann/multidiffabundanceA toolkit for the testing of differential abundance with many different tools
R UpdatedJun 13, 2023 -
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BiobakeryUtils.jl Public
Forked from EcoJulia/BiobakeryUtils.jlA companion package for Microbiome.jl for working with the Biobakery family of computational tools
Julia Other UpdatedApr 25, 2023 -
ampliseq Public
Forked from nf-core/ampliseqAmplicon sequencing analysis workflow using DADA2 and QIIME2
Nextflow MIT License UpdatedJan 23, 2023 -
16S-Metatranscriptomic-Analysis Public
Forked from BioinfoIPBLN/16S-Metatranscriptomic-AnalysisNextFlow Pipelines for Qiime2 & Kraken2 metagenomic|metatranscriptomic analyses
Nextflow MIT License UpdatedDec 19, 2022 -
Miniature_Pallete Public
Extracting miniature painting colors from an image
Python MIT License UpdatedJun 19, 2022 -
etn Public
Forked from TVR-AelinTX/etnElectronic Traineeship Notebook for BIT @ HOME
MIT License UpdatedJun 6, 2022 -
scikit-optimize Public
Forked from scikit-optimize/scikit-optimizeSequential model-based optimization with a `scipy.optimize` interface
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 20, 2021
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