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Support NetCDF v3 files in chunking control code. #5897

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merged 3 commits into from
Apr 3, 2024

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@pp-mo pp-mo commented Apr 2, 2024

Fixes #5864
This supports when a netcdf variable ".chunking()" call returns None.

The added test fails without the fix.

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pp-mo commented Apr 2, 2024

Note from offline discussion with @trexfeathers . I also attempted to include the context-operation "improvements" that I discussed, but they caused unexpected failures. Something there is clearly not working the way I thought, so I'll leave that to another day.

@pp-mo pp-mo requested a review from trexfeathers April 2, 2024 17:32
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codecov bot commented Apr 2, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 89.76%. Comparing base (375da2d) to head (154fc91).
Report is 22 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #5897      +/-   ##
==========================================
+ Coverage   89.73%   89.76%   +0.03%     
==========================================
  Files          92       93       +1     
  Lines       22898    22982      +84     
  Branches     5453     5477      +24     
==========================================
+ Hits        20547    20630      +83     
- Misses       1620     1622       +2     
+ Partials      731      730       -1     

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@trexfeathers trexfeathers merged commit 4296238 into SciTools:main Apr 3, 2024
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tkknight added a commit to tkknight/iris that referenced this pull request Apr 3, 2024
* upstream/main: (163 commits)
  Restore latest Whats New files.
  Whats new updates for `v3.9.0rc0` (SciTools#5899)
  nep29: drop py39 and support py312 (SciTools#5894)
  Support NetCDF v3 files in chunking control code. (SciTools#5897)
  Avoid computing lazy scalar coordinates when printing a Cube (v2) (SciTools#5896)
  Force pytest colour output on GitHub Actions (SciTools#5895)
  Make typing 3.9 compatible.
  Improve typing readability.
  Updated environment lockfiles (SciTools#5892)
  [pre-commit.ci] pre-commit autoupdate
  What's New entry for SciTools#5740 .
  Iris to GeoVista conversion (SciTools#5740)
  Try Union for type hinting.
  Type hinting.
  Fix typo.
  Re-introduce backwards compatible warning.
  Updated documentation.
  Remove loose references to fill value warnings.
  Advertise structured_um_loading performance regression.
  [pre-commit.ci] pre-commit autoupdate
  ...
@valeriupredoi
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great work here! I'd have put a massive exception "Don't blithering feed me NETCDF3 data!" instead, if I was you, though 🤣

tkknight added a commit to tkknight/iris that referenced this pull request Apr 10, 2024
…th_numpydoc

* upstream/main: (39 commits)
  Bump scitools/workflows from 2024.03.3 to 2024.04.0 (SciTools#5907)
  [pre-commit.ci] pre-commit autoupdate (SciTools#5906)
  Updated environment lockfiles (SciTools#5904)
  Ignore flaticon.com in linkchecks. (SciTools#5905)
  Implement lazy area weights (SciTools#5658)
  Add option to specify chunks in `iris.util.broadcast_to_shape` (SciTools#5620)
  Unpin sphinx (SciTools#5901)
  DOC: clarify save_pairs_from_cube docstring (SciTools#5783)
  Restore latest Whats New files.
  Whats new updates for `v3.9.0rc0` (SciTools#5899)
  nep29: drop py39 and support py312 (SciTools#5894)
  Support NetCDF v3 files in chunking control code. (SciTools#5897)
  Avoid computing lazy scalar coordinates when printing a Cube (v2) (SciTools#5896)
  Force pytest colour output on GitHub Actions (SciTools#5895)
  Make typing 3.9 compatible.
  Improve typing readability.
  Updated environment lockfiles (SciTools#5892)
  [pre-commit.ci] pre-commit autoupdate
  What's New entry for SciTools#5740 .
  Iris to GeoVista conversion (SciTools#5740)
  ...
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Loading ERA5 data with CHUNK_CONTROL fails with TypeError
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