This R package is part of the echoverse suite that supports
echolocatoR: an automated
genomic fine-mapping pipeline.
If you use devoptera, please cite:
Brian M Schilder, Jack Humphrey, Towfique Raj (2021) echolocatoR: an automated end-to-end statistical and functional genomic fine-mapping pipeline, Bioinformatics; btab658, https://doi.org/10.1093/bioinformatics/btab658
if(!require("remotes")) install.packages("remotes")
remotes::install_github("RajLabMSSM/devoptera")
library(devoptera)
❓🦇❓ So what does devoptera mean,
anyways? (click to find out)
DevOps is a software engineering methodology that is itself an amalgam of software Devlopment and IT Operations.
Chiroptera is a the name of the phylogenetic order to which bats
belong. devoptera is part of the broader echoverse suite that
supports echolocatoR, and
echolocatoR is an R package that facilitates fine-mapping to pinpoint
causal genetic variants underlying complex traits.
You know, like bats do (kind of). 🦗〰️🦇
Brian
M. Schilder, Bioinformatician II
Raj Lab
Department
of Neuroscience, Icahn School of Medicine at Mount Sinai
devoptera::session_info()## ─ Session info ───────────────────────────────────────────────────────────────
## setting value
## version R version 4.3.1 (2023-06-16)
## os macOS Sonoma 14.1.1
## system aarch64, darwin20
## ui X11
## language (EN)
## collate en_US.UTF-8
## ctype en_US.UTF-8
## tz Europe/London
## date 2023-12-10
## pandoc 3.1.3 @ /Users/bms20/anaconda3/envs/pytorch/bin/ (via rmarkdown)
##
## ─ Packages ───────────────────────────────────────────────────────────────────
## package * version date (UTC) lib source
## badger 0.2.3 2023-01-28 [1] CRAN (R 4.3.0)
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## biocViews 1.70.0 2023-10-26 [1] Bioconductor
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## fs 1.6.3 2023-07-20 [1] CRAN (R 4.3.0)
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## R6 2.5.1 2021-08-19 [1] CRAN (R 4.3.0)
## RBGL 1.78.0 2023-10-26 [1] Bioconductor
## RColorBrewer 1.1-3 2022-04-03 [1] CRAN (R 4.3.0)
## Rcpp 1.0.11 2023-07-06 [1] CRAN (R 4.3.0)
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## remotes 2.4.2.9000 2023-11-17 [1] Github (r-lib/remotes@6fe8836)
## renv 1.0.3 2023-09-19 [1] CRAN (R 4.3.1)
## rlang 1.1.2 2023-11-04 [1] CRAN (R 4.3.1)
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##
## [1] /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library
##
## ──────────────────────────────────────────────────────────────────────────────