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@QTIM-Lab

QTIM Lab

The Quantitative Translational Imaging in Medicine Lab at the Martinos Center (MGH/HST)

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  1. DeepNeuro DeepNeuro Public

    A deep learning python package for neuroimaging data. Made by:

    Jupyter Notebook 123 36

  2. qtim_Tutorials qtim_Tutorials Public

    Jupyter notebooks and other tutorials for medical imaging and deep learning, courtesy of the QTIM lab.

    Jupyter Notebook 28 15

  3. SiameseChange SiameseChange Public

    Python 17 5

  4. qtim_ROP qtim_ROP Public

    Code base for preprocessing, segmentation and classification of retinal images

    Python 14 8

  5. qtim_tools qtim_tools Public

    A set of tools used for quantitative analysis of and machine learning from 3D medical images. Created by the Quantitative Tumor Imaging Lab at Martinos.

    HTML 11 5

  6. Assessing-Saliency-Maps Assessing-Saliency-Maps Public

    Python 10 2

Repositories

Showing 10 of 110 repositories
  • model_conversion Public

    For cervical cancer model conversion to tflite and executorch for use on edge (android) devices

    QTIM-Lab/model_conversion’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 27, 2024
  • CorisDB_Curation Public

    Repo for organizing the db scheme of our coris_db

    QTIM-Lab/CorisDB_Curation’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Sep 25, 2024
  • preprocessing Public

    `preprocessing` is a python library designed for the purpose of preprocessing MRI data at QTIM. It currently supports reorganization of dicom and nifti files to follow BIDS conventions, dicom to nifti conversion, and preprocessing for brain data. Its outputs are intended to follow the BIDS organizational scheme.

    QTIM-Lab/preprocessing’s past year of commit activity
    Python 1 0 1 0 Updated Sep 23, 2024
  • codabench Public Forked from codalab/codabench

    Codabench is a flexible, easy-to-use and reproducible benchmarking platform. Check our paper at Patterns Cell Press https://hubs.li/Q01fwRWB0

    QTIM-Lab/codabench’s past year of commit activity
    Python 0 Apache-2.0 27 0 0 Updated Sep 17, 2024
  • Challenges Public

    Machine Learning Challenges hosted on Codabench

    QTIM-Lab/Challenges’s past year of commit activity
    Python 0 2 0 1 Updated Sep 17, 2024
  • QTIM-Lab/FL_ViT_pretraining’s past year of commit activity
    Python 2 0 0 0 Updated Sep 16, 2024
  • trame_optimeyes Public

    trame tools and visualizations

    QTIM-Lab/trame_optimeyes’s past year of commit activity
    Python 2 2 1 0 Updated Sep 12, 2024
  • QTIM-Lab/segmentationMonaiLabel’s past year of commit activity
    Python 0 1 0 0 Updated Sep 4, 2024
  • QTIM-Lab/video_action_annotation’s past year of commit activity
    JavaScript 0 0 0 0 Updated Sep 3, 2024
  • QTIM-Lab/video_action_annotator’s past year of commit activity
    0 0 0 0 Updated Sep 3, 2024

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