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browse.php
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<!DOCTYPE html>
<html>
<head>
<meta charset="UTF-8">
<title>Browse - MDPD</title>
<link rel = "stylesheet" type = "text/css" href = "css/main.css" />
<link rel = "stylesheet" type = "text/css" href = "css/browse.css" />
<script type = "text/javascript" src = "js/browse.js"></script>
</head>
<body>
<div class = "section_header">
<center><p class="title">MDPD - Microbiome Database of Pulmonary Diseases</p></center>
</div>
<div class = "section_menu">
<center>
<table cellpadding="3px">
<tr class="nav">
<td class="nav"><a href="index.php" class="side_nav">Home</a></td>
<td class="nav"><a href="#" class="active">Browse</a></td>
<td class="nav"><a href="statistics.php" class="side_nav">Statistics</a></td>
<td class="nav"><a href="about.php" class="side_nav">About</a></td>
<td class="nav"><a href="help.html" class="side_nav">Help</a></td>
<td class="nav"><a href="team.html" class="side_nav">Team</a></td>
</tr>
</table>
</center>
</div>
<div class = "section_left" id="section_left">
<div style="width:100%;"><a href="#sec-1" class="browse_side_nav">1. Disease-wise BioProjects</a></div>
<div style="width:100%;"><a href="#sec-2" class="browse_side_nav">2. Disease subgroup-wise BioProjects</a></div>
<div style="width:100%;"><a href="#sec-3" class="browse_side_nav">3. Disease-wise taxonomic profile</a></div>
<div style="width:100%;"><a href="#sec-4" class="browse_side_nav">4. Disease-wise similarity analysis</a></div>
<div style="width:100%;"><a href="#sec-5" class="browse_side_nav">5. Differential analysis of disease pairs</a></div>
</div>
<script>
window.onscroll = function() {makeSticky()};
var header = document.getElementById("section_left");
var sticky = header.offsetTop;
function makeSticky() {
if (window.pageYOffset > sticky) {
header.classList.add("sticky");
} else {
header.classList.remove("sticky");
}
}
</script>
<div class = "section_middle" style="width:72%;">
<div class="browse-heading" id="sec-1">1. Disease-wise BioProjects</div>
<div class="button-group">
<button type="button" onclick="getBioProjects('Asthma', 'disease-wise-results')">Asthma</button>
<button type="button" onclick="getBioProjects('COPD', 'disease-wise-results')">COPD</button>
<button type="button" onclick="getBioProjects('COVID-19', 'disease-wise-results')">COVID-19</button>
<button type="button" onclick="getBioProjects('Cystic Fibrosis', 'disease-wise-results')">Cystic Fibrosis</button>
<button type="button" onclick="getBioProjects('Lung Cancer', 'disease-wise-results')">Lung Cancer</button>
<button type="button" onclick="getBioProjects('Pneumonia', 'disease-wise-results')">Pneumonia</button>
<button type="button" onclick="getBioProjects('Tuberculosis', 'disease-wise-results')">Tuberculosis</button>
</div>
<div class="browse-result" id="disease-wise-results">foo</div>
<div class="browse-heading" id="sec-2">2. Disease subgroup-wise BioProjects</div>
<table class="browse-summary">
<tr>
<td class="row_heading">COPD</td>
<td class="odd">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('COPD Stable', 'subgroup-wise-results')">COPD Stable</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('COPD Exacerbation', 'subgroup-wise-results')">COPD Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('COPD Start of Exacerbation', 'subgroup-wise-results')">COPD Start of Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('COPD End of Exacerbation', 'subgroup-wise-results')">COPD End of Exacerbation</button>
</div>
</td>
</tr>
<tr>
<td class="row_heading">Asthma</td>
<td class="even">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Asthma Exacerbation', 'subgroup-wise-results')">Asthma Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Atopic Asthma', 'subgroup-wise-results')">Atopic Asthma</button>
</div>
</td>
</tr>
<tr>
<td class="row_heading">Cystic Fibrosis</td>
<td class="odd">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Cystic Fibrosis Exacerbation', 'subgroup-wise-results')">Cystic Fibrosis Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Cystic Fibrosis Normal Exacerbation', 'subgroup-wise-results')">Cystic Fibrosis Normal Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Cystic Fibrosis Post Exacerbation', 'subgroup-wise-results')">Cystic Fibrosis Post Exacerbation</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Cystic Fibrosis No Exacerbation', 'subgroup-wise-results')">Cystic Fibrosis No Exacerbation</button>
</div>
</td>
</tr>
<tr>
<td class="row_heading">Lung Cancer</td>
<td class="even">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Adeno Squamous Carcinoma', 'subgroup-wise-results')">Adeno Squamous Carcinoma</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Adenocarcinoma', 'subgroup-wise-results')">Adenocarcinoma</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Adenocarcinoma BAC Features', 'subgroup-wise-results')">Adenocarcinoma BAC Features</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Adenocarcinoma Mixed Features', 'subgroup-wise-results')">Adenocarcinoma Mixed Features</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Bronchioalveolar Carcinoma', 'subgroup-wise-results')">Bronchioalveolar Carcinoma</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Large Cell Lung Carcinoma', 'subgroup-wise-results')">Large Cell Lung Carcinoma</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Non Small Cell Lung Cancer', 'subgroup-wise-results')">Non Small Cell Lung Cancer</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Poorly Differentiated Carcinoma', 'subgroup-wise-results')">Poorly Differentiated Carcinoma</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Small Cell Lung Cancer', 'subgroup-wise-results')">Small Cell Lung Cancer</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Squamous Cell Carcinoma', 'subgroup-wise-results')">Squamous Cell Carcinoma</button>
</div>
</td>
</tr>
<tr>
<td class="row_heading">Pneumonia</td>
<td class="odd">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Streptococcus pneumoniae Pneumonia', 'subgroup-wise-results')">Streptococcus pneumoniae Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Mycoplasma pneumoniae Pneumonia', 'subgroup-wise-results')">Mycoplasma pneumoniae Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Adenovirus Pneumonia', 'subgroup-wise-results')">Adenovirus Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Culture Negative Pneumonia', 'subgroup-wise-results')">Culture Negative Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Culture Positive Pneumonia', 'subgroup-wise-results')">Culture Positive Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Post Treatment Pneumonia', 'subgroup-wise-results')">Post Treatment Pneumonia</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Pre Treatment Pneumonia', 'subgroup-wise-results')">Pre Treatment Pneumonia</button>
</div>
</td>
</tr>
<tr>
<td class="row_heading">Tuberculosis</td>
<td class="even">
<div class="button-group">
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('TB Mycobacterium africanum', 'subgroup-wise-results')">TB Mycobacterium africanum</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('TB Mycobacterium tuberculosis', 'subgroup-wise-results')">TB Mycobacterium tuberculosis</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Month Treatment Tuberculosis', 'subgroup-wise-results')">Month Treatment Tuberculosis</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Week Treatment Tuberculosis', 'subgroup-wise-results')">Week Treatment Tuberculosis</button>
<button type="button" style="width:auto;float:left;" onclick="getSubgroupBioProjects('Zero Day Tuberculosis', 'subgroup-wise-results')">Zero Day Tuberculosis</button>
</div>
</td>
</tr>
</table>
<div class="browse-result" id="subgroup-wise-results">foo</div>
<div class="browse-heading" id="sec-3">
3. Disease-wise taxonomic profile (Krona plot) across isolation sources
</div>
<table class="browse-summary">
<tr>
<th>Disease</th>
<th>Assay type</th>
<th>Isolation sources</th>
<th>Taxonomic profile (Krona plot)</th>
</tr>
<tr>
<td rowspan="2" class="row_heading">Asthma</td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (22), Bronchial mucosa (24), Sputum (118), Stool (174)</td>
<!-- <td class="odd">BAL (22), Bronchial brush (44), Bronchial mucosa (24), Sputum (118), Stool (174)</td> -->
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Asthma")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<!-- <a target="_blank" href="<?php //echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Asthma")."&is=".urlencode("Bronchial Brush");?>"><button type="button" style="margin:2px;">Bronchial brush</button></a> -->
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Asthma")."&is=".urlencode("Bronchial Mucosa");?>"><button type="button" style="margin:2px;">Bronchial mucosa</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Asthma")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Asthma")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="odd">WMS</td>
<td class="odd">Sputum (5), Stool (25)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Asthma")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Asthma")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="2" class="row_heading">COPD</td>
<td class="even">Amplicon</td>
<td class="even">BAL (4), Lung tissue (18), Sputum (1077)<sup class="link" id="footnote_link_1"><b>**</b></sup>, Stool (28)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COPD")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COPD")."&is=".urlencode("Lung Tissue");?>"><button type="button" style="margin:2px;">Lung tissue</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COPD")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COPD")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="even">WMS</td>
<td class="even">Sputum (15), Stool (44)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("COPD")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("COPD")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="2" class="row_heading">COVID-19</td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (57), Stool (202)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COVID-19")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("COVID-19")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="odd">WMS</td>
<td class="odd">Stool (58)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("COVID-19")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="2" class="row_heading">Cystic Fibrosis</td>
<td class="even">Amplicon</td>
<td class="even">BAL (96), Colon mucus (13), Sputum (188), Stool (309)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("Colon Mucus");?>"><button type="button" style="margin:2px;">Colon mucus</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="even">WMS</td>
<td class="even">Sputum (124), Stool (19)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Cystic Fibrosis")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="1" class="row_heading">Pneumonia</td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (42), Endotracheal Aspirate (150), Stool (413)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Pneumonia")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Pneumonia")."&is=".urlencode("Endotracheal Aspirate");?>"><button type="button" style="margin:2px;">Endotracheal Aspirate</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Pneumonia")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="2" class="row_heading">Tuberculosis</td>
<td class="even">Amplicon</td>
<td class="even">Sputum (58), Stool (149)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Tuberculosis")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Tuberculosis")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="even">WMS</td>
<td class="even">Stool (48)</td>
<td class="even">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Tuberculosis")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td rowspan="2" class="row_heading">Healthy</td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (19), Colon mucus (12), Sputum (11), Stool (392)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Healthy")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">BAL</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Healthy")."&is=".urlencode("Colon Mucus");?>"><button type="button" style="margin:2px;">Colon mucus</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Healthy")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=Amplicon&ds=".urlencode("Healthy")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
<tr>
<td class="odd">WMS</td>
<td class="odd">Sputum (4), Stool (119)</td>
<td class="odd">
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Healthy")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Sputum</button></a>
<a target="_blank" href="<?php echo "krona.php?type=DISEASE&at=WMS&ds=".urlencode("Healthy")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Stool</button></a>
</td>
</tr>
</table>
<p id="footnote1" class="section-footnote"><sup class="link"><b>**</b></sup> - Large Krona files. May take longer time to load.</p>
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</script>
<!--<div class="browse-heading">
3. Disease-wise differential analysis (LDA plot) of amplicon data
across isolation sources
</div>
<table class="browse-summary">
<tr>
<th>Disease</th>
<th>Biome</th>
<th>Isolation sources</th>
<th>Linear Discriminant Analysis (LDA) plot</th>
</tr>
<tr>
<td rowspan="1">Asthma</td>
<td>Lung</td>
<td>Sputum (118), BAL (22), Bronchial mucosa (24), Bronchial brush (44)</td>
<td><button type="button" style="margin:2px;" onclick="">LDA Asthma-Lung</button></td>
</tr>
<tr>
<td rowspan="1">COPD</td>
<td>Lung</td>
<td>Sputum (1077), BAL (4), Lung tissue (18)</td>
<td><button type="button" style="margin:2px;" onclick="">LDA COPD-Lung</button></td>
</tr>
<tr>
<td rowspan="2">Cystic Fibrosis</td>
<td>Lung</td>
<td>Sputum (188), BAL (96)</td>
<td><button type="button" style="margin:2px;" onclick="">LDA: Cystic Fibrosis-Lung</button></td>
</tr>
<td>Gut</td>
<td>Stool (309), Colon mucus(13)</td>
<td><button type="button" style="margin:2px;" onclick="">LDA: Cystic Fibrosis-Gut</button></td>
<tr>
<tr>
<td rowspan="1">Pneumonia</td>
<td>Lung</td>
<td>BAL (42), Endotracheal Aspirate (18)</td>
<td><button type="button" style="margin:2px;" onclick="">LDA Pneumonia-Lung</button></td>
</tr>
</table>-->
<div class="browse-heading" id="sec-4">
4. Disease-wise similarity analysis across Gut-Lung biome (UpSet plot and Likert plot)
</div>
<table class="browse-summary">
<tr>
<th>Disease</th>
<th>Assay Type</th>
<th>Lung isolation source</th>
<th>Gut isolation source</th>
<th>Similarity Analysis</th>
</tr>
<tr>
<td rowspan="2" class="row_heading">Asthma</td>
<td class="odd">Amplicon</td>
<td class="odd">Sputum (118)</td>
<td class="odd">Stool (172)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Asthma")."&at=Amplicon&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td class="odd">WMS</td>
<td class="odd">Sputum (5)</td>
<td class="odd">Stool (25)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Asthma")."&at=WMS&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="2" class="row_heading">COPD</td>
<td class="even">Amplicon</td>
<td class="even">Sputum (1077)</td>
<td class="even">Stool (28)</td>
<td class="even"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("COPD")."&at=Amplicon&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td class="even">WMS</td>
<td class="even">Sputum (15)</td>
<td class="even">Stool (44)</td>
<td class="even"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("COPD")."&at=WMS&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="1" class="row_heading">COVID-19 <sup class="link" id="footnote_link_2">*</sup></td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (57)</td>
<td class="odd">Stool (202)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("COVID-19")."&at=Amplicon&is=".urlencode("BAL_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="2" class="row_heading">Cystic Fibrosis</td>
<td class="even">Amplicon</td>
<td class="even">Sputum (187)</td>
<td class="even">Stool (309)</td>
<td class="even"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Cystic Fibrosis")."&at=Amplicon&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td class="even">WMS</td>
<td class="even">Sputum (124)</td>
<td class="even">Stool (19)</td>
<td class="even"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Cystic Fibrosis")."&at=WMS&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="1" class="row_heading">Pneumonia <sup class="link" id="footnote_link_3">*</sup></td>
<td class="odd">Amplicon</td>
<td class="odd">Endotracheal Aspirate (150)</td>
<td class="odd">Stool (413)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Pneumonia")."&at=Amplicon&is=".urlencode("Endotracheal Aspirate_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="1" class="row_heading">Tuberculosis <sup class="link" id="footnote_link_4">*</sup></td>
<td class="even">Amplicon</td>
<td class="even">Sputum (58)</td>
<td class="even">Stool (149)</td>
<td class="even"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Tuberculosis")."&at=Amplicon&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td rowspan="2" class="row_heading">Healthy</td>
<td class="odd">Amplicon</td>
<td class="odd">BAL (19)</td>
<td class="odd">Stool (392)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Healthy")."&at=Amplicon&is=".urlencode("BAL_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
<tr>
<td class="odd">WMS</td>
<td class="odd">Sputum (4)</td>
<td class="odd">Stool (119)</td>
<td class="odd"><a target="_blank" href="<?php echo "similarity.php?ds=".urlencode("Healthy")."&at=WMS&is=".urlencode("Sputum_Stool"); ?>"><button type="button" style="margin:2px;">Get result</button></a></td>
</tr>
</table>
<p id="footnote2" class="section-footnote"><sup class="link">*</sup> No WMS data available for COVID-19, Pneumonia and Tuberculosis lung microbiome.</p>
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<div class="browse-heading" id="sec-5">
5. Differential analysis of disease pairs (LDA plot and heatmap)
</div>
<table class="browse-summary">
<tr>
<th></th>
<th style="width:14%;">Asthma</th>
<th style="width:14%;">COPD</th>
<th style="width:14%;">COVID-19</th>
<th style="width:14%;">Cystic Fibrosis</th>
<th style="width:14%;">Pneumonia</th>
<th style="width:14%;">Tuberculosis</th>
</tr>
<tr>
<th>COPD</th>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-COPD-pair')">Show</button></td>
<td></td>
<td></td>
<td></td>
<td></td>
<td></td>
</tr>
<tr>
<th>COVID-19</th>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-COVID-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COPD-COVID-pair')">Show</button></td>
<td></td>
<td></td>
<td></td>
<td></td>
</tr>
<tr>
<th>Cystic Fibrosis</th>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-cystic_fibrosis-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COPD-cystic_fibrosis-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COVID-cystic_fibrosis-pair')">Show</button></td>
<td></td>
<td></td>
<td></td>
</tr>
<tr>
<th>Pneumonia</th>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-pneumonia-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COPD-pneumonia-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COVID-pneumonia-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'cystic_fibrosis-pneumonia-pair')">Show</button></td>
<td></td>
<td></td>
</tr>
<tr>
<th>Tuberculosis</th>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-tuberculosis-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COPD-tuberculosis-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COVID-tuberculosis-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'cystic_fibrosis-tuberculosis-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'pneumonia-tuberculosis-pair')">Show</button></td>
<td></td>
</tr>
<tr>
<th>Healthy</th>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'asthma-healthy-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COPD-healthy-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'COVID-healthy-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'cystic_fibrosis-healthy-pair')">Show</button></td>
<td class="odd"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'pneumonia-healthy-pair')">Show</button></td>
<td class="even"><button type="button" style="margin:2px;" onclick="showDiseasePairResults('disease-pair-results', 'tuberculosis-healthy-pair')">Show</button></td>
</tr>
</table>
<div class="browse-result" id="disease-pair-results">foo</div>
<div class="browse-result" id="asthma-COPD-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - COPD</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="5" class="row_heading">Asthma - COPD</td>
<td rowspan="3" class="odd">Amplicon</td><td rowspan="2" class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COPD")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COPD")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">BAL</td>
<td colspan="2" class="odd">No plot !! SVD error.</td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma COPD")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COPD")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COPD")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even">No plot !! SVD error.</td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COPD")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COPD")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="asthma-COVID-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - COVID-19</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">Asthma - COVID-19</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COVID-19")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COVID-19")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COVID-19")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COVID-19")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_COVID-19")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_COVID-19")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for COVID-19.</p>
</div>
<div class="browse-result" id="asthma-cystic_fibrosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - Cystic Fibrosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="5" class="row_heading">Asthma - Cystic Fibrosis</td>
<td rowspan="3" class="odd">Amplicon</td><td class="odd" rowspan="2">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="asthma-pneumonia-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - Pneumonia</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">Asthma - Pneumonia</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No WMS data available for Pneumonia.</p>
</div>
<div class="browse-result" id="asthma-tuberculosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - Tuberculosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">Asthma - Tuberculosis</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Tuberculosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Tuberculosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for Tuberculosis.</p>
</div>
<div class="browse-result" id="asthma-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Asthma - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="5" class="row_heading">Asthma - Healthy</td>
<td rowspan="3" class="odd">Amplicon</td>
<td rowspan="2" class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td colspan="2" class="even">No markers found.</td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Asthma_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Asthma_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="COPD-COVID-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COPD - COVID-19</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">COPD - COVID-19</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd" colspan="2">No plot !! SVD error.</td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_COVID-19")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_COVID-19")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_COVID-19")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_COVID-19")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for COVID-19.</p>
</div>
<div class="browse-result" id="COPD-cystic_fibrosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COPD - Cystic Fibrosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="4" class="row_heading">COPD - Cystic Fibrosis</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="COPD-pneumonia-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COPD - Pneumonia</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">COPD - Pneumonia</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd" colspan="2">No plot !! SVD error.</td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No WMS data available for Pneumonia.</p>
</div>
<div class="browse-result" id="COPD-tuberculosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COPD - Tuberculosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">COPD - Tuberculosis</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Tuberculosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Tuberculosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?&dp=".urlencode("COPD_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for Tuberculosis.</p>
</div>
<div class="browse-result" id="COPD-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COPD - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="5" class="row_heading">COPD - Healthy</td>
<td rowspan="3" class="odd">Amplicon</td>
<td rowspan="2" class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Healthy")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Healthy")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COPD_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COPD_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="COVID-cystic_fibrosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COVID-19 - Cystic Fibrosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">COVID-19 - Cystic Fibrosis</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Cystic Fibrosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for COVID-19.</p>
</div>
<div class="browse-result" id="COVID-pneumonia-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COVID-19 - Pneumonia</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">COVID-19 - Pneumonia</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">
N.B. - <br/>
1. No WMS data available for Pneumonia.<br/>
2. No Lung WMS data available for COVID-19.
</p>
</div>
<div class="browse-result" id="COVID-tuberculosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COVID-19 - Tuberculosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">COVID-19 - Tuberculosis</td>
<td rowspan="1" class="odd">Amplicon</td><td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">
N.B. - <br/>
1. No Lung Amplicon data available of same isolation sources for COVID-19 and Tuberculosis.<br/>
2. No Lung WMS data available for both COVID-19 and Tuberculosis.
</p>
</div>
<div class="browse-result" id="COVID-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> COVID-19 - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="4" class="row_heading">COVID-19 - Healthy</td>
<td rowspan="2" class="odd">Amplicon</td>
<td rowspan="1" class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("COVID-19_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("COVID-19_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for COVID-19.</p>
</div>
<div class="browse-result" id="cystic_fibrosis-pneumonia-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Cystic Fibrosis - Pneumonia</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">Cystic Fibrosis - Pneumonia</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Pneumonia")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Pneumonia")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No WMS data available for Pneumonia.</p>
</div>
<div class="browse-result" id="cystic_fibrosis-tuberculosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Cystic Fibrosis - Tuberculosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">Cystic Fibrosis - Tuberculosis</td>
<td rowspan="2" class="odd">Amplicon</td><td class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd" colspan="2">No plot !! SVD error.</td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Tuberculosis")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No Lung WMS data available for Tuberculosis.</p>
</div>
<div class="browse-result" id="cystic_fibrosis-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Cystic Fibrosis - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="6" class="row_heading">Cystic Fibrosis - Healthy</td>
<td rowspan="4" class="odd">Amplicon</td>
<td rowspan="2" class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="odd">Gut</td><td class="odd">Colon mucus</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Colon Mucus");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Colon Mucus");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="2" class="even">WMS</td><td class="even">Lung</td><td class="even">Sputum</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=WMS&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="even">Gut</td><td class="even">Stool</td>
<td class="even"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Cystic Fibrosis_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="even"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Cystic Fibrosis_Healthy")."&at=WMS&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
</div>
<div class="browse-result" id="pneumonia-tuberculosis-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Pneumonia - Tuberculosis</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="1" class="row_heading">Pneumonia - Tuberculosis</td>
<td rowspan="1" class="odd">Amplicon</td><td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Pneumonia_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Pneumonia_Tuberculosis")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">
N.B. -<br/>
1. No WMS data available for both Pneumonia<br/>
2. No Lung WMS data available for Tuberculosis.<br/>
3. No Lung Amplicon data available of same isolation sources for Pneumonia and Tuberculosis.
</p>
</div>
<div class="browse-result" id="pneumonia-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Pneumonia - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="2" class="row_heading">Pneumonia - Healthy</td>
<td rowspan="2" class="odd">Amplicon</td>
<td rowspan="1" class="odd">Lung</td><td class="odd">BAL</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Pneumonia_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Pneumonia_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("BAL");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Pneumonia_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Pneumonia_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
</table>
<p class="section-footnote">N.B. - No WMS data available for Pneumonia.</p>
</div>
<div class="browse-result" id="tuberculosis-healthy-pair">
<p class="browse-result-heading"><i>Disease pair:</i> Tuberculosis - Healthy</p>
<table class="browse-result-summary">
<tr><th>Disease-pair</th><th>Assay type</th><th>Biome</th><th>Isolation source</th><th>LDA plot</th><th>Heatmap</th></tr>
<tr>
<td rowspan="3" class="row_heading">Tuberculosis - Healthy</td>
<td rowspan="2" class="odd">Amplicon</td>
<td rowspan="1" class="odd">Lung</td><td class="odd">Sputum</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Tuberculosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Tuberculosis_Healthy")."&at=Amplicon&biome=".urlencode("Lung")."&is=".urlencode("Sputum");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td class="odd">Gut</td><td class="odd">Stool</td>
<td class="odd"><a target="_blank" href="<?php echo "lda.php?type=DISEASE&dp=".urlencode("Tuberculosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get LDA plot</button></a></td>
<td class="odd"><a target="_blank" href="<?php echo "heatmap.php?dp=".urlencode("Tuberculosis_Healthy")."&at=Amplicon&biome=".urlencode("Gut")."&is=".urlencode("Stool");?>"><button type="button" style="margin:2px;">Get heatmap</button></td>
</tr>
<tr>
<td rowspan="1" class="even">WMS</td><td class="even">Gut</td><td class="even">Stool</td>