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setup.py
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setup.py
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#! /usr/bin/env python3
import os
from setuptools import setup
def read_file(file_name):
path = os.path.join(os.path.dirname(__file__), file_name)
with open(path) as f:
lines = f.readlines()
return "\n".join(lines)
VERSION = read_file("mchap/version.py").split('"')[1]
setup(
name="mchap",
version=VERSION,
author="Tim Millar",
author_email="[email protected]",
description="Polyploid micro-haplotype assembly",
long_description=read_file("README.rst"),
entry_points={"console_scripts": ["mchap=mchap.application.cli:main"]},
packages=[
"mchap",
"mchap/application",
"mchap/assemble",
"mchap/calling",
"mchap/encoding",
"mchap/encoding/integer",
"mchap/encoding/character",
"mchap/io",
"mchap/io/vcf",
],
python_requires=">3.7.0",
keywords=["biology", "bioinformatics", "genetics", "genomics"],
classifiers=[
"Development Status :: 4 - Beta",
"Environment :: Console",
"Intended Audience :: Science/Research",
"Natural Language :: English",
"Operating System :: POSIX :: Linux",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
)