Commits

Commits on Jun 4, 2023

Improve file path management. Remove working directory changes outside CNA calls. (VanLoo-lab#7 )
NMNS93
authoredJun 4, 2023

Commits on Apr 25, 2023

Setup CAMDAC library (VanLoo-lab#5 )
NMNS93
authoredApr 25, 2023

Commits on Sep 4, 2022

Merge pull request VanLoo-lab#3 from VanLoo-lab/dev
NMNS93
authoredSep 4, 2022
Ensure CAMDAC install uses ASCAT v2.5.3
NMNS93
committedSep 4, 2022

Commits on Jul 14, 2022

Merge pull request VanLoo-lab#1 from VanLoo-lab/add_test
NMNS93
authoredJul 14, 2022

Commits on Jun 30, 2022

formatting code and edits to plotting functions
elarosecadieux
committedJun 30, 2022

Commits on Apr 21, 2022

Make explicit call to plot when saving fragment length histrogram
NMNS93
committedApr 21, 2022
Revert to original dir.create behaviour in format_output.R
NMNS93
committedApr 21, 2022
Remove trailing argument in format_output.R:dir.create
NMNS93
committedApr 21, 2022

Commits on Apr 20, 2022

Fix bug with PDF device selection
NMNS93
committedApr 20, 2022
Add code to skip cna creation if directory exists. Fix ggsave error
NMNS93
committedApr 20, 2022
Add code to return empty dataframe in get_allele_counts when segments have no coverage. Fix ggsave bug.
Nana Mensah
committedApr 20, 2022

Commits on Sep 8, 2021

Update to manual
elarosecadieux
authoredSep 8, 2021

Commits on May 13, 2021

Update README.md
elarosecadieux
authoredMay 13, 2021
.html update
elarosecadieux
authoredMay 13, 2021

Commits on May 6, 2021

Fixed run_methylation_data_processing bug
elarosecadieux
authoredMay 6, 2021
Delete .DS_Store file
elarosecadieux
authoredMay 6, 2021
Fixed runASCAT.m bug
elarosecadieux
authoredMay 6, 2021
Fix bug
elarosecadieux
authoredMay 6, 2021

Commits on May 5, 2021

Initial commit
elarosecadieux
committedMay 5, 2021