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GeneMark-ETP Public
Forked from gatech-genemark/GeneMark-ETPGeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology
AMPL UpdatedOct 16, 2024 -
braker-snake Public
Simple snakemake workflows for handling BRAKER on large data sets
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Statistics & R Materials
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Klebsiella_protein_analysis Public
Documentation and software for analysis of lipoproteins in Klebsiella pneumoniae
Python UpdatedJul 14, 2024 -
GenomeAnnotation_Workshop Public
Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV
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teaching Public
Forked from bpucker/teachingThis repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
1 UpdatedJan 23, 2024 -
compleasm Public
Forked from huangnengCSU/compleasmA genome completeness evaluation tool based on miniprot
Python Apache License 2.0 UpdatedDec 27, 2023 -
EviAnn_release Public
Forked from alekseyzimin/EviAnn_releaseThis is the standalone version of the EviAnn pipeline
M4 GNU General Public License v3.0 UpdatedDec 18, 2023 -
BRAKER-TSEBRA-Workshop Public
This repository contains course materials for a workshop on structural genome annotation with BRAKER and TSEBRA
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GALBA-data Public
Repository that describes and contains data used for the manuscript on GALBA
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OMArk Public
Forked from DessimozLab/OMArkPython GNU Lesser General Public License v3.0 UpdatedApr 3, 2023 -
PhyloKernel Public
Forked from MareikeFischer/PhyloKernelMathematica code for PhyloNetReductions
Mathematica UpdatedJan 7, 2023 -
metaeuk Public
Forked from soedinglab/metaeukMetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
C GNU General Public License v3.0 UpdatedDec 8, 2022 -
Liftoff Public
Forked from agshumate/LiftoffAn accurate GFF3/GTF lift over pipeline
Python GNU General Public License v3.0 UpdatedOct 5, 2022 -
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pyprog Public
Forked from fwilde/pyprogAn introductory Python course for people with programming experience
Jupyter Notebook UpdatedAug 24, 2021 -
StatistikIBilder Public
Bilder zu den JupyterNotebooks von Statistik I
GNU General Public License v3.0 UpdatedApr 16, 2021 -
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PythonCompact Public
Python compact course (preparatory for more advanced courses)
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Bioinf_pract_lecture Public
Lecture materials for the course "Bioinformatisches Praktikum" at University of Greifswald
Jupyter Notebook GNU General Public License v3.0 UpdatedMar 10, 2021 -
Reconstruct-Parser Public
Parser for Reconstruct XML files of electron microscopy images with marked contours
Roff GNU General Public License v3.0 UpdatedSep 2, 2019
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