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  • University of Chinese Academy of Science

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38 results for source starred repositories
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Jupyter Notebook 20 10 Updated Jun 29, 2021

asari, metabolomics data preprocessing

Python 39 9 Updated Oct 4, 2024

Mass spectrometry imaging molecular spatial probability maps.

R 6 Updated Mar 15, 2024

Out-of-core statistical computing and signal processing

R 55 4 Updated Oct 9, 2024

Line-by-line profiling for Python

Python 2,696 119 Updated Oct 12, 2024

The similarity score for spectral comparison

Jupyter Notebook 69 36 Updated Jul 15, 2024

Grok open release

Python 49,481 8,326 Updated Aug 30, 2024

https://github.com/gankLei-X/DeepION

Python 4 Updated Mar 12, 2024

Cloud engine and platform for metabolite annotation for imaging mass spectrometry

TypeScript 47 10 Updated Oct 12, 2024

Python Implementation of the msiPL by Abdelmoula et al.

Python 26 6 Updated Jul 11, 2021

Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.

Jupyter Notebook 11 5 Updated Dec 22, 2021

The Java library to run Deep Learning models

Java 29 6 Updated Oct 9, 2024

MAss spectra alignment tool for MSI data

C++ 16 5 Updated Jun 6, 2022
Python 149 25 Updated Feb 18, 2024

Mass spectrometry imaging toolbox

R 39 14 Updated Oct 2, 2024

Search spectral library with entropy similarity

JavaScript 20 3 Updated Apr 29, 2024

A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery

HTML 43 25 Updated Aug 28, 2023

MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.

R 15 3 Updated Nov 14, 2023

Universal workbench incorporating msdial, msfinder, and mrmprobs

C# 51 14 Updated Oct 12, 2024
R 10 4 Updated Jul 10, 2022

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8,526 876 Updated Oct 13, 2024

Python wrapper for the PubChem PUG REST API.

Python 387 108 Updated Apr 12, 2024

An annotated implementation of the Transformer paper.

Jupyter Notebook 5,633 1,218 Updated Apr 7, 2024
Python 31 6 Updated Jun 11, 2024

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.

Python 45 55 Updated Sep 18, 2024

Tutorials to learn how to work with the RDKit

Jupyter Notebook 258 74 Updated Mar 19, 2023

Comparing popular interactive plotting packages for Python

HTML 13 3 Updated Feb 9, 2022

Implementation of Siamese Networks for image one-shot learning by PyTorch, train and test model on dataset Omniglot

Python 283 62 Updated Jun 4, 2021
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