Commits

Commits on May 21, 2024

Merge pull request #65 from Griffan/develop_branch_with_backward_cpp
Griffan
committedMay 21, 2024

Commits on May 20, 2024

update readme to reflect VCF format requirements
Griffan
committedMay 20, 2024
add in various VCF records QC filters
Griffan
committedMay 20, 2024

Commits on May 19, 2024

fix sample fields parsing with '.'
Griffan
committedMay 19, 2024

Commits on May 18, 2024

add segfault handler for debugging
Griffan
committedMay 18, 2024

Commits on May 7, 2024

Merge pull request #64 from yfarjoun/patch-2
Griffan
committedMay 7, 2024
Merge pull request #63 from yfarjoun/patch-1
Griffan
committedMay 7, 2024

Commits on May 6, 2024

Update README.md
yfarjoun
committedMay 6, 2024
Update README.md
yfarjoun
committedMay 6, 2024

Commits on Feb 21, 2024

Merge pull request #59 from cheehongsg/master
Griffan
committedFeb 21, 2024
Delete resource/test/problematic.pileup
Griffan
committedFeb 21, 2024
TEST: set up proper unit test
cheehongsg
committedFeb 21, 2024

Commits on Feb 18, 2024

BUG: maintain pileup strand info
cheehongsg
committedFeb 18, 2024
Merge branch 'Griffan:master' into master
cheehongsg
committedFeb 18, 2024

Commits on Feb 17, 2024

Merge pull request #60 from Griffan/cheehongsg/dev
Griffan
committedFeb 17, 2024
update tests
Griffan
committedFeb 17, 2024
update travis.yml
Griffan
committedFeb 17, 2024
update travis.yml
Griffan
committedFeb 17, 2024
update travis.yml
Griffan
committedFeb 17, 2024
REQ: problematic pileup
cheehongsg
committedFeb 17, 2024

Commits on Feb 16, 2024

Revert "FIX: handle last base of a read"
cheehongsg
committedFeb 16, 2024
FIX: handle last base of a read
cheehongsg
committedFeb 16, 2024
Merge branch 'master' of https://github.com/cheehongsg/VerifyBamID
cheehongsg
committedFeb 16, 2024
FIX: segfault with DI cigar op (pileup |seq|!=|qual|)
cheehongsg
committedFeb 16, 2024

Commits on Jan 7, 2024

move numPC check into UD file reading
Griffan
committedJan 7, 2024

Commits on Oct 1, 2023

remove max_depth modification
Griffan
committedOct 1, 2023

Commits on Aug 21, 2022

Update README.md
Griffan
committedAug 21, 2022

Commits on Jan 25, 2022

1. add prefix "chr" to b38 exome resource files so that it is compatible with GRCh38
Griffan
committedJan 25, 2022

Commits on Dec 2, 2021

update htslib api name
Griffan
committedDec 2, 2021

Commits on Oct 14, 2021

Merge pull request #31 from lmtani/update-dockerfile
Griffan
committedOct 14, 2021

Commits on Oct 13, 2021

fix: blank line at the end of dockerfile
lmtani
committedOct 13, 2021
build: update dockerfile
lmtani
committedOct 13, 2021

Commits on Jan 16, 2021

1. Update dockerfile to use g++-7
Griffan
committedJan 16, 2021
1. Fix shared library loading in dockerfile building
Griffan
committedJan 16, 2021
1. Update Dockerfile
Griffan
committedJan 16, 2021