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Illegal Instruction Error: Ubuntu 20.04.6 & Docker #1513

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AriBunnell opened this issue Oct 16, 2023 · 1 comment
Closed

Illegal Instruction Error: Ubuntu 20.04.6 & Docker #1513

AriBunnell opened this issue Oct 16, 2023 · 1 comment

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@AriBunnell
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Describe the bug
When trying to run either the BreastTexturePipeline or LIBRA from the CLI from the latest CaPTK Docker container I get a fatal error

To Reproduce
Steps to reproduce the behavior:

  1. docker run --rm -it -v $(pwd)/test:/app -v {local_img_dir}:/images -v {local_out_dir}:/output --entrypoint /bin/bash cbica/captk
  2. /work/CaPTk/bin/install/appdir/usr/bin/captk /work/CaPTk/bin/install/appdir/usr/bin/BreastTexturePipeline.cwl -i /images/{image}.dcm -o /output or /work/CaPTk/bin/install/appdir/usr/bin/libra /images/{image}.dcm /output
  3. See error

Expected behavior
Expect the LIBRA or BreastTexturePipeline to execute completely

CaPTk Version
CaPTk v1.9.0.RC

Desktop (please complete the following information):

  • OS: Ubuntu 20.04.6

Additional context
The code executes successfully to the same point with either command:

Running LIBRA-1.0.4 (Revision: 603) on MATLAB R2014b
  >> Analzying single file...
  >> Processing File 1/1: /images/{image}.dcm
   > Checking header
     > WARNING: Age information is missing. Use Default.
   > Checking passed.
...identifying appropriate training model
...using model:Hologic-Processed...
Masking out Breast
Running 15-class FCM
...Getting dense-cluster metrics (i.e. hierarchical agglomeration)

------------------------------------------------------------------------
        Illegal instruction detected at Mon Oct 16 23:21:28 2023
------------------------------------------------------------------------

Configuration:
  Crash Decoding     : Disabled
  Current Visual     : None
  Default Encoding   : UTF-8
  GNU C Library      : 2.17 stable
  MATLAB Architecture: glnxa64
  MATLAB Root        : /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84
  MATLAB Version     : 8.4.0.150421 (R2014b)
  Operating System   : Linux 5.4.0-153-generic #170-Ubuntu SMP Fri Jun 16 13:43:31 UTC 2023 x86_64
  Processor ID       : x86 Family 143 Model 49 Stepping 0, AuthenticAMD
  Software OpenGL    : 0
  Virtual Machine    : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
  Window System      : No active display

Fault Count: 1

Stack Trace

``` > Running LIBRA-1.0.4 (Revision: 603) on MATLAB R2014b >> Analzying single file... >> Processing File 1/1: /images/{image}.dcm > Checking header > WARNING: Age information is missing. Use Default. > Checking passed. ...identifying appropriate training model ...using model:Hologic-Processed... Masking out Breast Running 15-class FCM ...Getting dense-cluster metrics (i.e. hierarchical agglomeration) 
    Illegal instruction detected at Mon Oct 16 23:13:15 2023

Configuration:
Crash Decoding : Disabled
Current Visual : None
Default Encoding : UTF-8
GNU C Library : 2.17 stable
MATLAB Architecture: glnxa64
MATLAB Root : /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84
MATLAB Version : 8.4.0.150421 (R2014b)
Operating System : Linux 5.4.0-153-generic #170-Ubuntu SMP Fri Jun 16 13:43:31 UTC 2023 x86_64
Processor ID : x86 Family 143 Model 49 Stepping 0, AuthenticAMD
Software OpenGL : 0
Virtual Machine : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
Window System : No active display

Fault Count: 1

Abnormal termination:
Illegal instruction

Register State (from fault):
RAX = 00007fc9ad658000 RBX = 00007fc9ad664000
RCX = 000000000000000e RDX = 00007fca2bee7640
RSP = 00007fca2ee65100 RBP = 00000000000000cc
RSI = 0000000000000000 RDI = 00007fca2ee651d0

R8 = 0000000000000380 R9 = 00007fc9ad664000
R10 = 0000000000001368 R11 = 0000000000000678
R12 = 000000000000001c R13 = 00000000000000cc
R14 = 000000000000000c R15 = 000000000000001c

RIP = 00007fc9ba8fce02 EFL = 0000000000010212

CS = 0033 FS = 0000 GS = 0000

Stack Trace (from fault):
[ 0] 0x00007fc9ba8fce02 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30535170 mkl_blas_cnr_def_dgemm_kernel_bdz+00000210
[ 1] 0x00007fc9ba8f4665 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30500453 mkl_blas_cnr_def_xdgemm_bdz+00001381
[ 2] 0x00007fc9ba8f7097 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30511255 mkl_blas_cnr_def_xdgemm+00004087
[ 3] 0x00007fc9b8e8b674 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+02807412
[ 4] 0x00007fc9b8e87db3 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+02792883 mkl_blas_dgemm+00001475
[ 5] 0x00007fc9b8d2ae8b /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+01363595 DGEMM+00000363
[ 6] 0x00007fca089afd16 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01424662
[ 7] 0x00007fca08a03715 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01767189
[ 8] 0x00007fca08a038d2 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01767634
[ 9] 0x00007fca08a03e39 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01769017
[ 10] 0x00007fca38ffc2d5 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00545493
[ 11] 0x00007fca38fe3e34 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00446004 ZN13Mfh_MATLAB_fn11dispatch_fhEiPP11mxArray_tagiS2+00000244
[ 12] 0x00007fca3846b3a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05243811
[ 13] 0x00007fca38399c41 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04385857
[ 14] 0x00007fca3839a9be /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04389310
[ 15] 0x00007fca383a67e9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04437993
[ 16] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 17] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 18] 0x00007fca382fd26a /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744362
[ 19] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 20] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 21] 0x00007fca38ff9e07 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00536071
[ 22] 0x00007fca38277164 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03195236 inFullFevalFcn+00000196
[ 23] 0x00007fca38ffc2d5 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00545493
[ 24] 0x00007fca38fe3e34 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00446004 ZN13Mfh_MATLAB_fn11dispatch_fhEiPP11mxArray_tagiS2+00000244
[ 25] 0x00007fca38522e6b /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05996139
[ 26] 0x00007fca38524809 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06002697
[ 27] 0x00007fca3852503c /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06004796
[ 28] 0x00007fca383991a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04383139
[ 29] 0x00007fca383a686e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438126
[ 30] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 31] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 32] 0x00007fca382fd26a /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744362
[ 33] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 34] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 35] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 36] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 37] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 38] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 39] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 40] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 41] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 42] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 43] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 44] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 45] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 46] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 47] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 48] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 49] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 50] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 51] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 52] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 53] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 54] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 55] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 56] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 57] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 58] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 59] 0x00007fca38522ef4 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05996276
[ 60] 0x00007fca38524809 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06002697
[ 61] 0x00007fca3852503c /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06004796
[ 62] 0x00007fca383991a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04383139
[ 63] 0x00007fca383a686e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438126
[ 64] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 65] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 66] 0x00007fca382fb3c9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03736521
[ 67] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 68] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 69] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 70] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 71] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 72] 0x00007fca38325bf0 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03910640
[ 73] 0x00007fca38325449 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03908681
[ 74] 0x00007fca38268fd6 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03137494 inCallFcnWithTrap+00000086
[ 75] 0x00007fca382ecc0b /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03677195
[ 76] 0x00007fca3826a560 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03143008 _Z44inCallFcnWithTrapInDesiredWSAndPublishEventsiPP11mxArray_tagiS1_PKcbP15inWorkSpace_tag+00000096
[ 77] 0x00007fca38af8e84 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00650884 _ZN3iqm15BaseFEvalPlugin7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+00000356
[ 78] 0x00007fca398fb0d9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00712921
[ 79] 0x00007fca38af4926 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00633126
[ 80] 0x00007fca38ae07dd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00550877
[ 81] 0x00007fca460e8edb /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+01707739
[ 82] 0x00007fca35e4e63d /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwuix.so+00230973
[ 83] 0x00007fca461b01ea /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02523626
[ 84] 0x00007fca461b0524 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02524452
[ 85] 0x00007fca461ac07f /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02506879
[ 86] 0x00007fca461b14b5 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02528437
[ 87] 0x00007fca461b18e7 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02529511
[ 88] 0x00007fca461b1fc0 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02531264 _Z25svWS_ProcessPendingEventsiib+00000080
[ 89] 0x00007fca398e8248 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00635464
[ 90] 0x00007fca398e8564 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00636260
[ 91] 0x00007fca398d4cdd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00556253
[ 92] 0x00007fca46e0fea5 /lib64/libpthread.so.0+00032421
[ 93] 0x00007fca46b38b0d /lib64/libc.so.6+01043213 clone+00000109

If this problem is reproducible, please submit a Service Request via:
https://www.mathworks.com/support/contact_us/

A technical support engineer might contact you with further information.

Thank you for your help.** This crash report has been saved to disk as /root/matlab_crash_dump.727-1 **

Caught "std::exception" Exception message is:
FatalException

      std::terminate() detected at Mon Oct 16 23:13:15 2023

Configuration:
Crash Decoding : Disabled
Current Visual : None
Default Encoding : UTF-8
GNU C Library : 2.17 stable
MATLAB Architecture: glnxa64
MATLAB Root : /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84
MATLAB Version : 8.4.0.150421 (R2014b)
Operating System : Linux 5.4.0-153-generic #170-Ubuntu SMP Fri Jun 16 13:43:31 UTC 2023 x86_64
Processor ID : x86 Family 143 Model 49 Stepping 0, AuthenticAMD
Software OpenGL : 0
Virtual Machine : Java 1.7.0_11-b21 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
Window System : No active display

Fault Count: 2

Abnormal termination:
Illegal instruction

Register State (from fault):
RAX = 00007fc9ad658000 RBX = 00007fc9ad664000
RCX = 000000000000000e RDX = 00007fca2bee7640
RSP = 00007fca2ee65100 RBP = 00000000000000cc
RSI = 0000000000000000 RDI = 00007fca2ee651d0

R8 = 0000000000000380 R9 = 00007fc9ad664000
R10 = 0000000000001368 R11 = 0000000000000678
R12 = 000000000000001c R13 = 00000000000000cc
R14 = 000000000000000c R15 = 000000000000001c

RIP = 00007fc9ba8fce02 EFL = 0000000000010212

CS = 0033 FS = 0000 GS = 0000

Stack Trace (from fault):
[ 0] 0x00007fc9ba8fce02 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30535170 mkl_blas_cnr_def_dgemm_kernel_bdz+00000210
[ 1] 0x00007fc9ba8f4665 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30500453 mkl_blas_cnr_def_xdgemm_bdz+00001381
[ 2] 0x00007fc9ba8f7097 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+30511255 mkl_blas_cnr_def_xdgemm+00004087
[ 3] 0x00007fc9b8e8b674 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+02807412
[ 4] 0x00007fc9b8e87db3 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+02792883 mkl_blas_dgemm+00001475
[ 5] 0x00007fc9b8d2ae8b /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/mkl.so+01363595 DGEMM+00000363
[ 6] 0x00007fca089afd16 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01424662
[ 7] 0x00007fca08a03715 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01767189
[ 8] 0x00007fca08a038d2 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01767634
[ 9] 0x00007fca08a03e39 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmathlinalg.so+01769017
[ 10] 0x00007fca38ffc2d5 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00545493
[ 11] 0x00007fca38fe3e34 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00446004 ZN13Mfh_MATLAB_fn11dispatch_fhEiPP11mxArray_tagiS2+00000244
[ 12] 0x00007fca3846b3a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05243811
[ 13] 0x00007fca38399c41 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04385857
[ 14] 0x00007fca3839a9be /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04389310
[ 15] 0x00007fca383a67e9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04437993
[ 16] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 17] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 18] 0x00007fca382fd26a /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744362
[ 19] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 20] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 21] 0x00007fca38ff9e07 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00536071
[ 22] 0x00007fca38277164 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03195236 inFullFevalFcn+00000196
[ 23] 0x00007fca38ffc2d5 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00545493
[ 24] 0x00007fca38fe3e34 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00446004 ZN13Mfh_MATLAB_fn11dispatch_fhEiPP11mxArray_tagiS2+00000244
[ 25] 0x00007fca38522e6b /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05996139
[ 26] 0x00007fca38524809 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06002697
[ 27] 0x00007fca3852503c /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06004796
[ 28] 0x00007fca383991a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04383139
[ 29] 0x00007fca383a686e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438126
[ 30] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 31] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 32] 0x00007fca382fd26a /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744362
[ 33] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 34] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 35] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 36] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 37] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 38] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 39] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 40] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 41] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 42] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 43] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 44] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 45] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 46] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 47] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 48] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 49] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 50] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 51] 0x00007fca38348b70 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04053872
[ 52] 0x00007fca382f8e02 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03726850
[ 53] 0x00007fca382fb022 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03735586
[ 54] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 55] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 56] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 57] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 58] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 59] 0x00007fca38522ef4 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05996276
[ 60] 0x00007fca38524809 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06002697
[ 61] 0x00007fca3852503c /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+06004796
[ 62] 0x00007fca383991a3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04383139
[ 63] 0x00007fca383a686e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438126
[ 64] 0x00007fca383a6953 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04438355
[ 65] 0x00007fca384de284 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+05714564
[ 66] 0x00007fca382fb3c9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03736521
[ 67] 0x00007fca38300f87 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03760007
[ 68] 0x00007fca382fc6ff /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03741439
[ 69] 0x00007fca382fd334 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03744564
[ 70] 0x00007fca3837252e /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+04224302
[ 71] 0x00007fca39038329 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_dispatcher.so+00791337 ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2+00000697
[ 72] 0x00007fca38325bf0 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03910640
[ 73] 0x00007fca38325449 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03908681
[ 74] 0x00007fca38268fd6 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03137494 inCallFcnWithTrap+00000086
[ 75] 0x00007fca382ecc0b /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03677195
[ 76] 0x00007fca3826a560 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwm_interpreter.so+03143008 _Z44inCallFcnWithTrapInDesiredWSAndPublishEventsiPP11mxArray_tagiS1_PKcbP15inWorkSpace_tag+00000096
[ 77] 0x00007fca38af8e84 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00650884 _ZN3iqm15BaseFEvalPlugin7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+00000356
[ 78] 0x00007fca398fb0d9 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00712921
[ 79] 0x00007fca38af4926 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00633126
[ 80] 0x00007fca38ae07dd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00550877
[ 81] 0x00007fca460e8edb /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+01707739
[ 82] 0x00007fca35e4e63d /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwuix.so+00230973
[ 83] 0x00007fca461b01ea /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02523626
[ 84] 0x00007fca461b0524 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02524452
[ 85] 0x00007fca461ac07f /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02506879
[ 86] 0x00007fca461b14b5 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02528437
[ 87] 0x00007fca461b18e7 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02529511
[ 88] 0x00007fca461b1fc0 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02531264 _Z25svWS_ProcessPendingEventsiib+00000080
[ 89] 0x00007fca398e8248 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00635464
[ 90] 0x00007fca398e8564 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00636260
[ 91] 0x00007fca398d4cdd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00556253
[ 92] 0x00007fca46e0fea5 /lib64/libpthread.so.0+00032421
[ 93] 0x00007fca46b38b0d /lib64/libc.so.6+01043213 clone+00000109

Abnormal termination:
std::terminate()

Register State (captured):
RAX = fffffffffffffff0 RBX = 00007fca424814e8
RCX = 0000000000000000 RDX = 00007fca42470758
RSP = 00007fca2ee6ae20 RBP = 00007fca2ee6b1e0
RSI = 00007fca42224fb3 RDI = 00007fca2ee6ae30

R8 = 0000000000000000 R9 = 00007fca46b8dd40
R10 = 0000000000000000 R11 = 00007fca46b8dd40
R12 = 00007fca42491520 R13 = 00007fca2ee6be20
R14 = 00007fca2ee6be00 R15 = 00007fca2ee6c1e0

RIP = 00007fca42183f4e EFL = 0000000000000000

CS = 0000 FS = 0000 GS = 0000

Stack Trace (captured):
[ 0] 0x00007fca42183f4e /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwfl.so+00966478 _ZN2fl4diag5linux12context_base12capture_dataEv+00000030
[ 1] 0x00007fca42181424 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwfl.so+00955428
[ 2] 0x00007fca399210f5 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00868597
[ 3] 0x00007fca399232ca /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00877258
[ 4] 0x00007fca399233c1 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00877505
[ 5] 0x00007fca39923743 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00878403
[ 6] 0x00007fca399237b3 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00878515
[ 7] 0x00007fca47599386 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/sys/os/glnxa64/libstdc++.so.6+00385926
[ 8] 0x00007fca475993b3 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/sys/os/glnxa64/libstdc++.so.6+00385971
[ 9] 0x00007fca47599626 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/sys/os/glnxa64/libstdc++.so.6+00386598 __cxa_rethrow+00000070
[ 10] 0x00007fca38af4da7 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00634279
[ 11] 0x00007fca38ae07dd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwiqm.so+00550877
[ 12] 0x00007fca460e8edb /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+01707739
[ 13] 0x00007fca35e4e63d /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwuix.so+00230973
[ 14] 0x00007fca461b01ea /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02523626
[ 15] 0x00007fca461b0524 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02524452
[ 16] 0x00007fca461ac07f /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02506879
[ 17] 0x00007fca461b14b5 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02528437
[ 18] 0x00007fca461b18e7 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02529511
[ 19] 0x00007fca461b1fc0 /work/CaPTk/bin/install/appdir/usr/bin/../libexec/MCR/v84/bin/glnxa64/libmwservices.so+02531264 _Z25svWS_ProcessPendingEventsiib+00000080
[ 20] 0x00007fca398e8248 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00635464
[ 21] 0x00007fca398e8564 /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00636260
[ 22] 0x00007fca398d4cdd /work/CaPTk/bin/install/appdir/usr/libexec/MCR/v84/bin/glnxa64/libmwmcr.so+00556253
[ 23] 0x00007fca46e0fea5 /lib64/libpthread.so.0+00032421
[ 24] 0x00007fca46b38b0d /lib64/libc.so.6+01043213 clone+00000109

If this problem is reproducible, please submit a Service Request via:
https://www.mathworks.com/support/contact_us/

A technical support engineer might contact you with further information.

Thank you for your help.** This crash report has been saved to disk as /root/matlab_crash_dump.727-2 **

MATLAB is exiting because of fatal error
Libra did not succeed. Please recheck.
@AriBunnell
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This issue has been resolved by moving to a machine with Intel processors, rather than AMD.

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@AriBunnell