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Is 3-dimensional autoencoder for voxel data possible in caffe? #3764

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yi-ji opened this issue Mar 2, 2016 · 2 comments
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Is 3-dimensional autoencoder for voxel data possible in caffe? #3764

yi-ji opened this issue Mar 2, 2016 · 2 comments

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@yi-ji
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yi-ji commented Mar 2, 2016

Hi everyone.

I am a newbie in caffe and deep learning. Now I am going to train an convolutional autoencoder for medical voxel data (250 * 250 * 250). But I am not certain about few things. I would appreciate any helpful answers and advises.

  1. Is 3-d convolutional layer available in caffe?
  2. Is 3-d pooling layer available in caffe?
  3. If the answer to 1 or 2 is no, then how difficult would it be for me to implement a 3d layer myself? Should I turn to other frameworks like theano? (I think theano should be capable of 3d layers but it's way too complex to implement it.)

Besides, I have seen someone said that channel could be used as third dimension. Is that correct for such 250^3 voxel data?

Thank you!

@seanbell
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seanbell commented Mar 3, 2016

Please ask for usage/modeling help on the mailing list.

From https://github.com/BVLC/caffe/blob/master/CONTRIBUTING.md:

Please do not post usage, installation, or modeling questions, or other requests for help to Issues.
Use the caffe-users list instead. This helps developers maintain a clear, uncluttered, and efficient view of the state of Caffe.

@seanbell seanbell closed this as completed Mar 3, 2016
@futurely
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#3983

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