Skip to content
View Austin-s-h's full-sized avatar
10 followers · 8 following
  • Vertex Pharmaceuticals
  • Boston, MA

Achievements

Achievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

Achievements

Achievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

Organizations

@sansterbioanalytics

Block or report Austin-s-h

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Austin-s-h/README.md

Hey! I'm Austin, nice to meet you.

LinkedIn  Twitter  Email   
PhD, Molecular Biology and Genetics (Genetics, Genomics, and Development) from Cornell Unviersity.
Previously a graduate student studying multipotency and differentiation of neural crest cells using cutting-edge genomics from the Simoes-Costa lab at Cornell.

Genomic Analysis Toolkit:

RNA-Seq, scRNA-Seq, Spatial Transcriptomics, ATAC-Seq, scATAC-Seq, ChIP-Seq, CUT&RUN, CUT&TAG, Hi-C/Hi-ChIP, Nanopore Long-read Sequencing, Tomo-Seq, MPRA, AlphaFold, R-Shiny, Plotly, and more!

I code with:

R  Python  Git  Shell Script  Snakemake  Nextflow  Docker  Markdown 

I use:

AWS  Azure  Google Cloud  VS Code  Cloudflare 

I'm learning:

Solidity  TypeScript  Rust  Go  TensorFlow  PyTorch  GitHub Actions 

My Desktop:

Ryzen 5 5600X  GTX 3070  Windows 11  Linux Mint 

DNA Gif - https://tinyurl.com/dmj38yfc
Awesome Badges - https://github.com/Envoy-VC/awesome-badges

Pinned Loading

  1. NC_Timecourse NC_Timecourse Public

    Updated git with cleaned NC_Timecourse Repo

    R 1 1

  2. NC_scATAC NC_scATAC Public

    A neural crest single cell ATAC analysis notebook

    HTML 2

  3. Simoes-Costa-Lab/Primer_Tool Simoes-Costa-Lab/Primer_Tool Public

    A tool combining python, local blast, and the Ensembl REST API to design primers to genomic locations or genes.

    Python

  4. Simoes-Costa-Lab/conda_setup Simoes-Costa-Lab/conda_setup Public

    A conda environment file for uniform environment setup across users.

    Shell

  5. BSgenome_galGal6 BSgenome_galGal6 Public

    A BSgenome of the ENSEMBL assembly of galGal6

    R