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setup.py
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setup.py
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from setuptools import setup, find_packages
######## SHOULDN'T NEED EDITS BELOW THIS LINE ########
vsn = {}
with open("./janis_bioinformatics/__meta__.py") as fp:
exec(fp.read(), vsn)
version = vsn["__version__"]
description = vsn["description"]
with open("./README.md") as readme:
long_description = readme.read()
setup(
name="janis-pipelines.bioinformatics",
version=version,
description=description,
url="https://github.com/PMCC-BioinformaticsCore/janis-bioinformatics",
author="Michael Franklin, Evan Thomas, Mohammad Bhuyan",
author_email="[email protected]",
license="GNU",
packages=["janis_bioinformatics"]
+ [
"janis_bioinformatics." + p
for p in sorted(find_packages("./janis_bioinformatics"))
],
# Note: pip is not smart enough to include subdirectories (** also does not work)
package_data={"": ["*/test_data/*", "*/test_data/*/*", "*/test_data/*/*/*"]},
include_package_data=True,
entry_points={
"janis.extension": ["bioinformatics=janis_bioinformatics"],
"janis.tools": ["bioinformatics=janis_bioinformatics.tools"],
"janis.types": ["bioinformatics=janis_bioinformatics.data_types"],
"janis.datatype_transformations": [
"bioinformatics=janis_bioinformatics.transformations:transformations"
],
},
install_requires=["janis-pipelines.core >= 0.11.0"],
extras_require={
"tests": [
"nose",
"parameterized",
"janis-pipelines.unix >= 0.11.0",
"janis-pipelines.runner >= 0.11.0",
],
"ci": ["setuptools", "wheel", "twine",],
},
zip_safe=False,
long_description=long_description,
long_description_content_type="text/markdown",
classifiers=[
"Development Status :: 2 - Pre-Alpha",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
)