PLINK v1.90b5.1 64-bit (20 Dec 2017)
Options in effect:
  --allow-no-sex
  --assoc
  --bed extend_directly_genotyped_binary.bed
  --bim extend_directly_genotyped_binary.bim
  --counts
  --fam extend_directly_genotyped_binary.fam
  --mpheno 3
  --pheno phenotypes.txt

Hostname: jamesSP4Linux
Working directory: /home/james/Documents/Final Year Project
Start time: Thu Jan 18 16:03:14 2018

Note: --counts flag deprecated.  Use '--assoc counts' instead.
Random number seed: 1516291394
7905 MB RAM detected; reserving 3952 MB for main workspace.
Error: Failed to open extend_directly_genotyped_binary.bed.

End time: Thu Jan 18 16:03:14 2018